Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0494 ATGCCATCTAATTACTTTTCGAGATTTGGAACTTCGATTCGTAGATCAGTTGTGGGGAAAGAAGGTGGAATCGGGGACTCTGCTGAAGTTCTGATTGGACAGGGGAAGTTTTGGTTTGGTCGCTCAAAGTTTTTTCATTCTGTGAATAACTTAAGTTCTGTGGATCTGCGGCTAATTGTGCGCTCTGGTGTTGCCTTAGCTTCAAGCTCGGAATCGGTTGGCAGGAGAAGAACCTTGTCTGTAGTTGACACGCTATCTCGTACATTTTCTGTTCCGTCTGTATCAGGGCCTTCGTTTCAGGTCTGTGGATATCATATTGGCTGTGCGCTTGCCGGACCTGACCAGTTTTCGACTGGCACCAAAGTTCGGATTAAAACAATGGCCGCTCACATGTCCAGAGTTGTGGTTGGTGAATACTATTTAGATAACTCACATTTGAAGTGTAATCACCATTTATTGTCAACAAAGAATTGCAGTAATATCTGTTTAAGCACGAGTTTGAGGAATGGTGGGAAAGTGAGCATGAGTTTGAAAAACCATTGGCAGCCAGATAACCGCGCATTTCATGGCTATTTTATTTACAATGTTGCCAAGACGTGGTGCAGTTCTCACCCTTACATGCAGTCAGGATGTGGAGATTTCCATAGTTCTTCGACATCATGTTACTCTGTTGGGCCTGCTCATGATGTGCCTTTTGATACTTCTGCCCGAGATGAGCAGCTAACGAAATCTGCAGATTCAGCTGAACAGAAAACTCCTTCAGGAAAAGCCCTTAAGTTAATATCAGGATCATGCTACTTGCCTCATCCTGATAAAGAAGAAACTGGTGGAGAAGATGCTCATTTTATATGCTCTGAGGAACAAGCAATAGGGGTGGCAGATGGTGTTGGTGGCTGGGCAGATCTTGGTGTTAATGCTGGATATTACTCTCGGGAGCTCATGTCCAAATCAGTGGACGCTATTCAGGAGGAGCCCAAAGGTTCAATTGACCCTGCTAGGGTGCTGGAAAAAGCACACTCAAGCACAAAAGCTAAAGGTTCTTCTACAGCATGCATCATTGCACTTACTGATCAGGGACTTCATGCTATCAATTTGGGAGACAGTGGGTTTATGGTGGTACGTGATGGGTGCACCATATTCCGGTCCCCAGTGCAGCAACATGATTTCAACTTCACATACCAGCTGGAATGTGGTAGCAATGGTGATTTACCCAGTTCTGGTCAGGTTTTTACCATTCCTGTTGCACCTGGCGATGTGATAGTTGCTGGCACGGATGGGCTGTTTGATAACTTGTACAATAACGAGATTACAGCTGTGGTGGTTCATGCCATAAGAGCCGGCTTAAGCCCTCAGGTGACAGCCCAGAAGATAGCTGCATTGGCTCGTCAACGGGCACTGGATAAGGACAGGCAGACTCCTTTCTCAACTGCTGCTCAAGATGCTGGATTCCGTTACTACGGTGGCAAGCTTGATGATACTACAGTTGTAGTTTCATATATTGGCTCTGGAGATGCTTAA 1518 0.4552 MPSNYFSRFGTSIRRSVVGKEGGIGDSAEVLIGQGKFWFGRSKFFHSVNNLSSVDLRLIVRSGVALASSSESVGRRRTLSVVDTLSRTFSVPSVSGPSFQVCGYHIGCALAGPDQFSTGTKVRIKTMAAHMSRVVVGEYYLDNSHLKCNHHLLSTKNCSNICLSTSLRNGGKVSMSLKNHWQPDNRAFHGYFIYNVAKTWCSSHPYMQSGCGDFHSSSTSCYSVGPAHDVPFDTSARDEQLTKSADSAEQKTPSGKALKLISGSCYLPHPDKEETGGEDAHFICSEEQAIGVADGVGGWADLGVNAGYYSRELMSKSVDAIQEEPKGSIDPARVLEKAHSSTKAKGSSTACIIALTDQGLHAINLGDSGFMVVRDGCTIFRSPVQQHDFNFTYQLECGSNGDLPSSGQVFTIPVAPGDVIVAGTDGLFDNLYNNEITAVVVHAIRAGLSPQVTAQKIAALARQRALDKDRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYIGSGDA* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0494 505 Gene3D - 272 395 IPR036457 -
Apr9g0494 505 ProSiteProfiles PPM-type phosphatase domain profile. 261 500 IPR001932 -
Apr9g0494 505 SMART PP2C_4 251 498 IPR001932 -
Apr9g0494 505 Pfam Stage II sporulation protein E (SpoIIE) 289 497 IPR001932 -
Apr9g0494 505 PANTHER PROTEIN PHOSPHATASE 2C 89 504 IPR039123 -
Apr9g0494 505 PANTHER PROTEIN PHOSPHATASE 89 504 - -
Apr9g0494 505 Gene3D - 403 503 IPR036457 -
Apr9g0494 505 SMART PP2C_SIG_2 273 500 IPR001932 -
Apr9g0494 505 SUPERFAMILY PP2C-like 265 499 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0494 Apr-Chr9 6925550 6932081 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0494 K17508 - gmx:100805475 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0494 9 6925550 6932081 Apr9g0494 9 6925550 6932081 ECH