Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0486 ATGCTTGAAGCAATGGAGAGTTCAGTGAATGGTGGGTTCTCACAGTTGCAGAACTGTGGAGATAGTAGCGAGGAAGAGCTCTCTGTGCTTCCTCGTCACACCAAAGTGGTTGTAACTGGAAACAACCGCACCAAATCCGTGCTCGTTGGTCTTCAAGGTGTTGTTAAGAAGGCTGTTGGGTTAGGCGGGTGGCATTGGCTGGTTCTTACCAACGGCATTGAAGTGAAGCTACAGAGGAATGCTCTTAGTGTGATTGAAGCACCCACTGGGAATGAGGAGGATGACGACCTTGAATTTGAAAATATGCAGTGGAATGGATCAGATATGGCATCGGACAACAATCGAAAGTCGCACAAATCAAGGCACAAAATGCATAAATCGTTGGGATCATCTCATATGAGCTCGAGCAGGTCCTTCTCTGGTGATTGGCAGTCCAAGGAATCCATTTCTATGTCTCATGGGTGGACGAAGGTTGACTTAAGCAAATTGGAAATGGCTGCATTGTGGAGATATTGGCGACACTTCAATCTGGTTGATGTTGTTCCAAACCCATCAAAAGAACAACTTGTAGATGTTGTTCAGAGGCATTTCATGGCACAGCAAATGGACGAATTGCAGGCGATTGTGGGATTTGTTCAAGCTACAAAGAGGCTTAAGACTATGCAAATGATGGAGTGA 678 0.4558 MLEAMESSVNGGFSQLQNCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDNNRKSHKSRHKMHKSLGSSHMSSSRSFSGDWQSKESISMSHGWTKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLVDVVQRHFMAQQMDELQAIVGFVQATKRLKTMQMME* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0486 225 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 221 - -
Apr9g0486 225 MobiDBLite consensus disorder prediction 106 139 - -
Apr9g0486 225 Gene3D - 139 225 IPR038291 -
Apr9g0486 225 PANTHER SAP30 1 221 IPR024145 -
Apr9g0486 225 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 163 216 IPR025718 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0486 Apr-Chr9 6844563 6849577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0486 - - aprc:113846056 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0486 9 6844563 6849577 Apr9g0486 9 6844563 6849577 ECH