Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0316 ATGGCTCTTGTGACTCGAAATGCAGCCACGTGGCGCCTCCCTCAAAGAGTATTTTCCGTTTCTGTCCACAATGGTTCCTCCGGCACCGGCGCTCCCACTCAGTATGCTGCGTCACCATCTCCGGCGACTTCCTCTCCCGTCGGCGTCTCGAAGCCGGCGGAGTACGTTATTGCGAAGGTAGATAGCCTCTTGAACTGGGCCCGGCGCGGATCCATATGGCCCATGACGTTTGGGCTGGCTTGCTGCGCTGTCGAGATGATGCACACCGGTGGGGCCCGCTACGATTTGGACCGCTTTGGCATCATCTTCAGGCCTAGCCCACGCCAATCCGATTGCATGATCGTTGCCGGTACCCTCACCAATAAGATGGCTCCTGCTCTTCGCAAAGTTTATGATCAAATGCCTGAGCCAAGGTGGGTGATTTCTATGGGAAGTTGTGCTAATGGAGGTGGATACTACCATTATTCCTACTCTGTTGTTAGAGGATGTGACAGAATTGTTCCTGTTGACATATATATTCCGGGTTGTCCTCCAACTGCAGAGGCTTTGCTATATGGCCTCCTCCAACTCCAGAAGAAGATCAATAGGCGCAAGGACTTCCTCTGGTGGTGGACCAAGTGA 621 0.5362 MALVTRNAATWRLPQRVFSVSVHNGSSGTGAPTQYAASPSPATSSPVGVSKPAEYVIAKVDSLLNWARRGSIWPMTFGLACCAVEMMHTGGARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGLLQLQKKINRRKDFLWWWTK* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0316 206 Gene3D - 52 206 - -
Apr9g0316 206 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 81 190 IPR006137 GO:0051536
Apr9g0316 206 PANTHER NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL 2 206 - -
Apr9g0316 206 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 41 195 IPR006138 GO:0008137|GO:0048038|GO:0051539
Apr9g0316 206 PANTHER NADH DEHYDROGENASE 2 206 - -
Apr9g0316 206 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 162 178 IPR006138 GO:0008137|GO:0048038|GO:0051539
Apr9g0316 206 SUPERFAMILY HydA/Nqo6-like 54 203 - -
Apr9g0316 206 TIGRFAM nuoB_fam: NADH-quinone oxidoreductase, B subunit 56 196 IPR006138 GO:0008137|GO:0048038|GO:0051539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0316 Apr-Chr9 4136453 4137559 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0316 K03940 - gmx:100814025 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0316 9 4136453 4137559 Apr5g1412 5 18213614 18216314 PCT