Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0310 ATGTTGTCGTCTTCTTCAGCGAACAACGCCGAGGCTCTTAGGCGCAACCGCATCCTCTCAAGCAAGCTCTACTTCGATGTCTCTCCGTCTAAGGTTCCGCTTATCTACTCCGAGTCTTACGACATAGCCTTTCTCGGCATAGAGAAACTGCATCCGTTTGATTCATCTAAATGGGGACGCATTTGCCGATTCCTCGTCTCCCTTGGTATTCTTGATAAAAAATGCATCGTTGAGCCTCTTGAAGCTTCCAAGGATGATCTTCTAGTGGTACACTCAGAATCATACTTGAATAACCTGAAGGACAGTTCAAAAGTTTCTATGATAGTTGAGGTTCCTCCTGTGGCATTAATTCCCAACTGTCTTGTACAACAAAAAGTTCTTTTCCCATTCAGGAAGCAGGTTGGAGGAACTATATTGGCTGCAAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTGGGAGGAGGTTTTCATCACTGCTCTGCAGAGAGAGGAGGCGGATTCTGTGCTTATGCAGATATTTCTCTATGCATCCACTTTGCTTTTGTTCGGTTGAATATATCAAGGGTGATGATCATTGATCTTGATGCACATCAAGGAAATGGTCATGAAATGGACTTTGCCCATGACAGCCGAGTCTATATCCTTGACATGTACAACCCTGGAATATATCCTTTAGATTATGAGGCGAGAGACTACATTAATCAGAAAGTTGAAGTGAAGAGTGGGACACTCACAGAAGAGTACCTGCAAAAATTAGATGAAGCACTCCAGGTTGCTGGGCGTAGGTTTAACCCTGAGTTGGTAATTTATAATGCTGGAACTGACATCTTAGAAGGTGATCCATTAGGAAGGTTGAAGGTGAGTCCTGACGGAGTTGCCCTTAGAGATGAAAAAGTTTTTCAGTTTGCTCGAGATAAGAACATTCCTATCATCATGCTCACTTCAGGTGGTTACATGAAGTCCAGTGCTAGAGTCATTGCAGACTCAATAGTCAATCTTTCAAAGAAATGCTTAATAGAAACAAGCGCAGATCAAAAGACTACGTAA 1050 0.4286 MLSSSSANNAEALRRNRILSSKLYFDVSPSKVPLIYSESYDIAFLGIEKLHPFDSSKWGRICRFLVSLGILDKKCIVEPLEASKDDLLVVHSESYLNNLKDSSKVSMIVEVPPVALIPNCLVQQKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAERGGGFCAYADISLCIHFAFVRLNISRVMIIDLDAHQGNGHEMDFAHDSRVYILDMYNPGIYPLDYEARDYINQKVEVKSGTLTEEYLQKLDEALQVAGRRFNPELVIYNAGTDILEGDPLGRLKVSPDGVALRDEKVFQFARDKNIPIIMLTSGGYMKSSARVIADSIVNLSKKCLIETSADQKTT* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0310 349 PRINTS Histone deacetylase superfamily signature 155 178 IPR000286 -
Apr9g0310 349 PRINTS Histone deacetylase superfamily signature 189 204 IPR000286 -
Apr9g0310 349 PRINTS Histone deacetylase superfamily signature 266 276 IPR000286 -
Apr9g0310 349 SUPERFAMILY Arginase/deacetylase 29 334 IPR023696 -
Apr9g0310 349 Gene3D Histone deacetylase domain 31 349 IPR037138 -
Apr9g0310 349 CDD HDAC_classIV 51 334 IPR044150 GO:0004407|GO:0016575
Apr9g0310 349 PANTHER HISTONE DEACETYLASE 11 5 344 - -
Apr9g0310 349 PANTHER HISTONE DEACETYLASE 11 5 344 - -
Apr9g0310 349 Pfam Histone deacetylase domain 51 332 IPR023801 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0310 K11418 - gmx:100781276 637.491