Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0305 ATGAGGGAAGACAACCCATCAGAGAACAGGTCCAAAACTTCAAAATTTGCCGACCAAAACCAAGCCCCAAAGCTTCAAAATGCCAAAGGAGGCAATCCCAACAATAACAACCACTCCAAACCCAGGTTGTGGGGTGCTCACATTGTCAAAGGGTTCTCTGCTGACAAGAAAACCAAGCTTCATTCAACACTTGCTACCAAAAAACACACACTAACAACATCATCAACAACAACCACCACCGCCTCGGATGTTGTTGCAAACCAGAAGAACCCTTTTGTGCCTGCTCATTCCCGAGTAAAGAGGTCCCTCATAGGTGACTTGTCATGTTCCATGAATGCTGCTCAGGTTCATCCACATGCGTTCCCAACACATAGGAGACAATCATCCACTGATTTGTTCACTGAGTTGGATCACATGAGGAGCTTGTTGCAGGAGTCTAAGGAGAGAGAGGCCAAGTTGCATGCTGAGTTGGGAGAGTGTAGGAGGAAGCAATGTGAGGTTGATGAGCTTGTGAAGAGGGTTTCTTTGTTGGAAGAAGAGAAGGCTAGCCTCTCTGACCAATTGGCTGCTTTGACATGTGTCACTGAGAGACATGAGGAGGATGTGAAAGTGGAACACAAAGATAGTTCAGTGCAGAATCTTGAGCTTGAAGTTGTTGAATTGAGAAGGCTGAATAAGGAGCTGCAGATGCAGAAGAGGAACCTTACTTGCAGGCTCTCTTCTCTTGAGTCTCAGTTGTCTTGTCCTGCCAAATCTTCAGAGAGTGACATTGTTGCCAAAATCAAAGCTGAAGCATCATTGCTGAGGCTCACAAATGAAGACTTGTGCAAGCAAGTAGAAGGTTTACAGATGAGCAGATTGAATGAGGTTGAGGAGCTTGCCTACTTGAGGTGGGTGAATTCATGTTTGAGAAACGAGTTGAAGAATACATGCTCAGCATTGGATTCTGATAAGCTATCTAGCCCTCACTCTATTGTGAGCAATAGTGGAGACTGTGTTGTTAGTTCTTTCTCTGATCAAAGCTATAGGTACTTAAACTGTGGTAGTGCAAATAGGTTCAATTTGGTGAAGAAGCCTAAAAAGTGGCCCATAACTAGTGACCCTTTATCACAAGTAGAGTGCCCAGGTAGTCTCATTGAGAAAAATTGGATTGAATCAGATATAGGTGGAAGCCCCAGAAGAAGACACTCAATCAGTGGATCAAACTACTCAGAGGAAGAGGTTGTTTTGAGTAAGAGAAGACAATCTGATTGTTTTGTTTGTTCAAAAGAAATGGAAAAGGAATCAGTGCCATTGTCTGTTGACTCTGTTCAACAATCTGGTTTGGAGATTGTGCAAAGACCACAATACTGCCAAGAAGCTACCAAAATTTTGGCTTCTTCAGATGTTGAGAAGAGGGCACTACGAATTCCTAACCCCCCTCCAAGACCTTCATGTTCTATTTCTAGCAAAACAAAACAGGAAAGTTCAGCTCAAGTTCCACCTCCTCCACCTCCACCTCCCCCACCACCTCCTATGAATTTTGCATCAAGAAGTACCACAGCAATGGTAAAACGCGCTCCACAAGTCGTGGAATTGTACCATTCACTTATGAAGAGAGACTCTAGAAAGGATTCTTCAAATGGAGGACTCTCTGATGCACCAGATGTTGCTGATGTTCGTAGCAGCATGATTGGAGAAATTGAAAACCGTTCCTCACATTTGCTTGCTATAAAGGCAGATATTGAGACTCAGGGAGAATTTGTGAATTCATTGATTAGAGAGGTGAACAACGCAGTTTATCAGAACATAGAAGATGTAGTGGCATTTGTGAAGTGGCTGGATGATGAACTCTGCTTCCTTGTGGACGAGAGGGCTGTCCTTAAGCATTTCGATTGGCCAGAGAAGAAAGCTGACACATTAAGAGAGGCAGCATTTGGATATCAAGATTTGAAAAAATTAGAAACTGAAGTTTCCTCCTACAAGGACGATCCTCGGTTACCTTGTGATATTGCTCTAAAGAAAATGGTTGCATTATCCGAAAAGATGGAGCGTACAGTTTATAACCTTCTCCGCACAAGAGAGTCATTAATGCGTAACTGCAAGGAGTTTCAAATTCCCATAGAATGGATGCTTGATAATGGAATCATTGGCAAGATAAAGTTAAGCTCAGTAAAACTGGCCAAAAGGTATATGAAAAGGGTAGCTATGGAACTTCAAGCAAAGTCAGCCTTAGAAAAAGATCCTGCAATGGATTACATGCTTCTCCAAGGAGTGAGATTTGCTTTTAGAATCCATCAGTTTGCAGGAGGATTTGACGCAGAAACAATGCACGCATTTGAGGAACTTCGCAATCTAGCTTCTCTTCTTAACAAAACATAA 2361 0.4274 MREDNPSENRSKTSKFADQNQAPKLQNAKGGNPNNNNHSKPRLWGAHIVKGFSADKKTKLHSTLATKKHTLTTSSTTTTTASDVVANQKNPFVPAHSRVKRSLIGDLSCSMNAAQVHPHAFPTHRRQSSTDLFTELDHMRSLLQESKEREAKLHAELGECRRKQCEVDELVKRVSLLEEEKASLSDQLAALTCVTERHEEDVKVEHKDSSVQNLELEVVELRRLNKELQMQKRNLTCRLSSLESQLSCPAKSSESDIVAKIKAEASLLRLTNEDLCKQVEGLQMSRLNEVEELAYLRWVNSCLRNELKNTCSALDSDKLSSPHSIVSNSGDCVVSSFSDQSYRYLNCGSANRFNLVKKPKKWPITSDPLSQVECPGSLIEKNWIESDIGGSPRRRHSISGSNYSEEEVVLSKRRQSDCFVCSKEMEKESVPLSVDSVQQSGLEIVQRPQYCQEATKILASSDVEKRALRIPNPPPRPSCSISSKTKQESSAQVPPPPPPPPPPPPMNFASRSTTAMVKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVADVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIREVNNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFDWPEKKADTLREAAFGYQDLKKLETEVSSYKDDPRLPCDIALKKMVALSEKMERTVYNLLRTRESLMRNCKEFQIPIEWMLDNGIIGKIKLSSVKLAKRYMKRVAMELQAKSALEKDPAMDYMLLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0305 786 Coils Coil 160 194 - -
Apr9g0305 786 SUPERFAMILY Formin homology 2 domain (FH2 domain) 495 505 - -
Apr9g0305 786 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 786 IPR040265 -
Apr9g0305 786 MobiDBLite consensus disorder prediction 465 510 - -
Apr9g0305 786 MobiDBLite consensus disorder prediction 1 42 - -
Apr9g0305 786 MobiDBLite consensus disorder prediction 12 41 - -
Apr9g0305 786 MobiDBLite consensus disorder prediction 491 508 - -
Apr9g0305 786 Coils Coil 211 245 - -
Apr9g0305 786 PANTHER PROTEIN CHUP1, CHLOROPLASTIC-LIKE 1 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0305 Apr-Chr9 3985567 3989439 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0305 - - gmx:100818641 1264.6