Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0298 ATGGCGGAACCCAAAACCAAAAGCTACATTTCCTCAGAAGAACTCAACAAACACAACAAGCTCGACGACGCATGGATCTCCATCCACGGCAAGATCTACGACGTCTCCGACTGGCTCCACCGCCACCCCGGCGGCCACCTCCCTCTCCTCACCCTCGCCGGACAAGATGCCACCGACGCATTCCTCGCCTTCCACCCTCACACGGTGGCACACCGCCTCGCTCCACTCTTCACCGGCCACTTCCTCCGTGACTACACCGTCTCTGCCGTCTCCTCCGATTACCGCACCCTACTGAACCACCTCTCCCGCACCGGCCTCTTCGAACGCAAGGGCCACGGCGCGTGCGTTTCACTACTCTTAATTCTCTGCCTCCTCTTAATCAGCCTCTCTGGCGTCTTCTTTTCGGACCGCATGTGGGTGCACGTGGCATCGGGCGCGTTGATAGGGTTTATTTGGATTCAGAGTGGTTGGATTGGGCATGATTCTGGGCACTATCAGGTTATGTTGAACCGGAGGTTAAACCGTGCGGTTCAGATTCTCTCCGGTAACTGTCTCGCCGGAATAAGCATTGGGTGGTGGAAGTGGAACCACAATGCACACCACATTGCTTGTAATAGTCTTAACTTTGACCCTGATCTTCAGCATTTACCTTTCTTTGTTGTGTCATCAAGGTTCTTTAGTTCACTAACTTCTTGTTTCTACGAGAGGAAGATGAATTTTGATGCGTTTGCTAGGTTCTTGGTTAGTTACCAGCATTGGACATTTTACCCTGTGATGTGTTTTGCTAGGATTAATTTGTTCGCGCAGTCTTTTATGTTGTTGTTGTCTAAGAGAGATGTGCCTAATAGGGCTGTGGAGCTTTTGGGGATGCTTGCGTTTTGGGTTTGGTACCCTTTGTTGGTTTCTTGCTTGCCCAATTGGGGGGAGAGGGTTTTGTTTGTGGTGGTTAGTTTTTCTGTTGCTGGGATTCAGCATGTTCAGTTCTGTTTGAACCATTTTTCTTCTAATGTGTATTTGGGTCCACCGAGTGGGCATGATTGGTTCGAGATGCAGACTAATGGGACTCTTGATGTCAAGTGTTCTGCTTGGATGGATTGGTTTCATGGTGGGCTGCAGTTTCAGGTGGAGCACCATTTGTTTCCGCGGTTGCCACGGTGCCATCTTAGGAAGATTGCGCCTTTGGTTAGGGACCTTTGTAAGAAGCACAATCTTCCTTACAATTGTGTGTCCTTCTGGAAAGCCAATGTGCTCACGATTCAGACGCTGAGAAAGGCGGCGTTGCAGGCTCGGGATGCGTCTAATCCTGTTCCCAAAAATTTAGTTTGGGAAGCTGTTAATACTCATGGATGA 1350 0.4985 MAEPKTKSYISSEELNKHNKLDDAWISIHGKIYDVSDWLHRHPGGHLPLLTLAGQDATDAFLAFHPHTVAHRLAPLFTGHFLRDYTVSAVSSDYRTLLNHLSRTGLFERKGHGACVSLLLILCLLLISLSGVFFSDRMWVHVASGALIGFIWIQSGWIGHDSGHYQVMLNRRLNRAVQILSGNCLAGISIGWWKWNHNAHHIACNSLNFDPDLQHLPFFVVSSRFFSSLTSCFYERKMNFDAFARFLVSYQHWTFYPVMCFARINLFAQSFMLLLSKRDVPNRAVELLGMLAFWVWYPLLVSCLPNWGERVLFVVVSFSVAGIQHVQFCLNHFSSNVYLGPPSGHDWFEMQTNGTLDVKCSAWMDWFHGGLQFQVEHHLFPRLPRCHLRKIAPLVRDLCKKHNLPYNCVSFWKANVLTIQTLRKAALQARDASNPVPKNLVWEAVNTHG* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0298 449 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 7 91 IPR001199 -
Apr9g0298 449 Pfam Fatty acid desaturase 139 408 IPR005804 GO:0006629
Apr9g0298 449 Gene3D - 1 80 IPR036400 -
Apr9g0298 449 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 5 448 - -
Apr9g0298 449 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 79 IPR036400 -
Apr9g0298 449 PIRSF FA_sphingolip_des 1 436 IPR012171 GO:0016491
Apr9g0298 449 CDD Delta6-FADS-like 142 404 - -
Apr9g0298 449 Pfam Cytochrome b5-like Heme/Steroid binding domain 12 73 IPR001199 -
Apr9g0298 449 PANTHER FATTY ACID DESATURASE 2 5 448 IPR012171 GO:0016491
Apr9g0298 449 SMART Cyt_b5_2 10 82 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0298 Apr-Chr9 3893335 3896616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0298 1 449 Lipid Metabolism Gene Families AT2G46210 62.361 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0298 K21737 - gmx:100776476 734.176