Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0293 ATGGAGATCAATGCAGAGAATGCATCCTCACAAAGCATGAATTCAAACAAGTACATGATGGTACCTGAAAAACAACCTTACCGAACTAGGTACCACTTTCAACCTCCACAAAATTGGATGAATGATCCAAATGGACCAATGTACTATAAAGGAGTTTACCACTTTTTCTACCAGCATAACCCTTATGCGCCAACCTTTGGTAAAATTGTATGGGGTCATTCAGTATCCTATGATCTCATCAATTGGATTCATCTGAATCATGCTCTTGAACCAAGTGAACCTTATGACATTCATGGCTGCTATTCTGGCTCAGCCACAATCATCCATGGGCAAAAACCTGTTATTATGTACACTGGGGGTGATAATAATAAACATCAAGTTCAAAACTTGACTATGCCCAAGAATCTTTCAGACCCCTTCTTAAGGGAATGGGTCAAACACCCTCAAAACCCAGTCATGACTCCACCCAATGGAGTTGAAATGAAAAGTTTTAGAGACCCAACAACTGCTTGGGAGGGAAGTGATGGCAAATGGAGAGTAATAATTGGTGCTAAAAATGGTGATGAAGGGAAGGCTCTTATTTACCGAAGTGAGGATTTTGTTAATTGGACAGTACATCACAATCCTTTGTATACTTCTGATAGTAGTGGAATGTTGGAATGCCCAGACTTTTTTCCAGTGTTCATCAGTGGCACAAAAAATGGGGTGGACACATCAGTACAAAACTCAAGTGTTAAGCATGTTTTGAAATTGAGTTTTCAGAACAAACAACAAGAGCACTATTTACTAGGTAACTATCACCCTGATCAGGAAAAGTTTATCCCTGATGCTGATTTCACAAGAACTAGTGTGGAGTTAATATTGGACCATGGAAATTTTTATGCTGCCAAGACATTTTTTGACTATGCCAAGAGTAGGAGGATATTGTGGGGATGGTCAAAAGAAAATGACACTACACAAGATGATCTTGATAAAGGATGGGCTGGTCTACAGTGTATTCCAAGGCAGGTTTGGCTTGATAAAAGTGGGAAGCGATTGATACAGTGGCCAATTGAAGAGGTGGAAAAACTTCGTGACAAACAAATTACCATAATTGGAGAGAAAATCATTGGTGGATCAACTCTTGAAGTGACAGGTATCACTGCATCACAGGCCGATGTAGAAGTGTTATTTGAACTACCTGCCCTAGAAAGTGCAGAGTGGCTAGATCCTAGCGAAGTTGATCCTCATTTACTATGTAGTGAAGAATATGCATCAAGAAGTGGTACAATAGGGCCATTTGGTTTGTTAGCTTTAGCATCTGAGGACAGGGCAGAACACACTGCAATCTTCTTCAGAATTTATAGAGCTCCCAATAGATATGTATGTCTCATGTGCAGTGACCATAGCAGGTCTTCAACGCGGCAGGACCTTGATAAAAGCACATATGGAACTATATTTGACATAGACCCCAATCTCAAAACAATTTCACTAAGAAGCTTGATTGACCGATCCATTATTGAGAGTTTTGGGGATGAAGGGAGAGTTTGCATTACCAGTAGAGTTTATCCTTCATTGGCTATAGATGGAGATGCCCATCTTTATGTTTTCAACATGGGAAGTCAAAGTGTGGGAATCTCAAAACTAAATGCTTGGAGCATGAAGCATGCAGAAATTGACCATGAGGAAAGCATTTATCAGGATATTATATAG 1692 0.3989 MEINAENASSQSMNSNKYMMVPEKQPYRTRYHFQPPQNWMNDPNGPMYYKGVYHFFYQHNPYAPTFGKIVWGHSVSYDLINWIHLNHALEPSEPYDIHGCYSGSATIIHGQKPVIMYTGGDNNKHQVQNLTMPKNLSDPFLREWVKHPQNPVMTPPNGVEMKSFRDPTTAWEGSDGKWRVIIGAKNGDEGKALIYRSEDFVNWTVHHNPLYTSDSSGMLECPDFFPVFISGTKNGVDTSVQNSSVKHVLKLSFQNKQQEHYLLGNYHPDQEKFIPDADFTRTSVELILDHGNFYAAKTFFDYAKSRRILWGWSKENDTTQDDLDKGWAGLQCIPRQVWLDKSGKRLIQWPIEEVEKLRDKQITIIGEKIIGGSTLEVTGITASQADVEVLFELPALESAEWLDPSEVDPHLLCSEEYASRSGTIGPFGLLALASEDRAEHTAIFFRIYRAPNRYVCLMCSDHSRSSTRQDLDKSTYGTIFDIDPNLKTISLRSLIDRSIIESFGDEGRVCITSRVYPSLAIDGDAHLYVFNMGSQSVGISKLNAWSMKHAEIDHEESIYQDII* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0293 563 CDD GH32_Fruct1-like 38 339 - -
Apr9g0293 563 SMART glyco_32 32 507 IPR001362 GO:0004553|GO:0005975
Apr9g0293 563 Gene3D - 363 547 - -
Apr9g0293 563 Gene3D Glycosyl hydrolase domain; family 43 37 362 IPR023296 -
Apr9g0293 563 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 22 556 - -
Apr9g0293 563 ProSitePatterns Glycosyl hydrolases family 32 active site. 32 45 IPR018053 GO:0004553|GO:0005975
Apr9g0293 563 Pfam Glycosyl hydrolases family 32 N-terminal domain 32 350 IPR013148 -
Apr9g0293 563 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 22 556 - -
Apr9g0293 563 SUPERFAMILY Arabinanase/levansucrase/invertase 24 351 IPR023296 -
Apr9g0293 563 Pfam Glycosyl hydrolases family 32 C terminal 353 546 IPR013189 -
Apr9g0293 563 SUPERFAMILY Concanavalin A-like lectins/glucanases 350 549 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0293 Apr-Chr9 3824986 3828049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0293 42 555 Glycoside Hydrolase AT1G55120 52.481 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0293 K01193 - gmx:100806753 933.324