Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0292 ATGAAGATAATTGCACAGGTACTATTACTTGTGATATTGTCTTTTCTGCTATACTGCGGAAATGGAATTGAAACATCTACACATAGCATCAAGTACAAAGTACCTGAAAAACAACCTCACCGAACTTCTTATCACTTTCAGCCCCAACAAAATTGGATGAACGATCCAAATGGACCTATGTTCTACAAAGGTGTTTACCACCTTTTCTACCAACATAATCCTGAAGCAGCAACTTTTGGTGATAGGATTGTTTGGGGTCACTCTATATCCTATGATCTCATCAATTGGATTCATCTGAATAATACTATTGAACCAAGTGAACCATTTGACATTAATAGCTGCTGGTCAGGCTCTGCCACTGTGATCCCAGGTGAAGAAGAACAACCTGTGATTTTGTACACTGGGATTGATGATAAAAAACATCAAGTTCAGAACTTAGCTATACCAAAGAATCTATCAGACCCCTTCTTAAGGGAATGGACCAAGCACCCTCAGAACCCTGTGATGACTCCACCTAGTGGAGTTGAAGTGGATAATTTCAGAGACCCTTCAACTGCTTGGCAAGGAAAAGATGGAAAATGGAGGGTAGTCGTTGGTGCTCAAAATGGTGATGAAGGAAAGACCATTCTCTACCAAAGTGAGGATTTTGTTAATTGGAAAGTGGATCCTAATCCTTTTTATGCATCGGATAATACTGGAGTTTGTGAGTGTCCAGATTTCTTTCCTGTGTACATAAATGGCAGCACAATTGGAGTGGATACATCTGTGCAAAATCCTAGTGTTAGACATGTCTTGAAAATAAGCTATCTAAGCAAACATCATGATTATTATTTTCTTGGTAAATATGTCTCTGATGAGGAAAACTTTATTCCTGATGTCAGATTTACAGGAACTAGTTTGGACTTAAGGTATGACTATGGTAAATTTTATGCTTCCAAGTCATTTTTTGATTATGACAAAAACAGGAGGATATTGTGGGGATGGGTGAACGAATCTGACACCACACAAAATGACTTTGAGAAAGGATGGGCTGGTCTACAGTCAATTCCAAGGCAAGTTTGGCTTGATAAAAGTGGGAAGCGATTGGTGCAATGGCCAATTGAAGAGGTAGGAGAACTACGTGGCAAGCAAGTCAGCATAACAGGAGAAAAACTCATCAGTGGATCAACTCTTGAAGTCTCAGGTATCACAACATCACAGGCCGATGTAGAAGTGTTGTTTGAGCTACCTGAACTAGAAAGTGCAGAGTTTTTAGATCCCAATGGAGTTGATCCCCAACTACTATGTAGCCAAGAATATGCATCAAGAAGTGGCATAATAGGACCATTTGGTTTGTTAGCTTTAGCTTCAAAGGATCTCAAAGAGCATACTTCAATCTTCTTCAGAATATATAGAGCTCCCAATAGATACATATGCCTCATGTGCAGTGACCAAAGCAGGTCCTCATTGAGGCAAGACCTTGACAAAACCACATACGGAACAATCTTTGACATAGATCCCAATCTCAAAAGCATTTCACTTAGAAGTTTGATTGACCACTCCATTATTGAGAGTTTTGGGGATGAAGGGCGAGCTTGCATCACAAGTAGAGTGTATCCATCATTGGCTATAGACAAAGATGCCCATCTTTATGCATTTAACTATGGAAGACAGGGTGTGCTTATCTCAAAACTGAATGCATGGAGCATGAAGCAAGCAGATATTGGTTATGAGGGAAATACATGCTATGCTTAA 1734 0.3968 MKIIAQVLLLVILSFLLYCGNGIETSTHSIKYKVPEKQPHRTSYHFQPQQNWMNDPNGPMFYKGVYHLFYQHNPEAATFGDRIVWGHSISYDLINWIHLNNTIEPSEPFDINSCWSGSATVIPGEEEQPVILYTGIDDKKHQVQNLAIPKNLSDPFLREWTKHPQNPVMTPPSGVEVDNFRDPSTAWQGKDGKWRVVVGAQNGDEGKTILYQSEDFVNWKVDPNPFYASDNTGVCECPDFFPVYINGSTIGVDTSVQNPSVRHVLKISYLSKHHDYYFLGKYVSDEENFIPDVRFTGTSLDLRYDYGKFYASKSFFDYDKNRRILWGWVNESDTTQNDFEKGWAGLQSIPRQVWLDKSGKRLVQWPIEEVGELRGKQVSITGEKLISGSTLEVSGITTSQADVEVLFELPELESAEFLDPNGVDPQLLCSQEYASRSGIIGPFGLLALASKDLKEHTSIFFRIYRAPNRYICLMCSDQSRSSLRQDLDKTTYGTIFDIDPNLKSISLRSLIDHSIIESFGDEGRACITSRVYPSLAIDKDAHLYAFNYGRQGVLISKLNAWSMKQADIGYEGNTCYA* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0292 577 CDD GH32_Fruct1-like 51 355 - -
Apr9g0292 577 ProSitePatterns Glycosyl hydrolases family 32 active site. 45 58 IPR018053 GO:0004553|GO:0005975
Apr9g0292 577 Gene3D - 380 563 - -
Apr9g0292 577 Pfam Glycosyl hydrolases family 32 C terminal 370 562 IPR013189 -
Apr9g0292 577 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 34 570 - -
Apr9g0292 577 SUPERFAMILY Arabinanase/levansucrase/invertase 37 367 IPR023296 -
Apr9g0292 577 SUPERFAMILY Concanavalin A-like lectins/glucanases 366 565 IPR013320 -
Apr9g0292 577 SMART glyco_32 45 523 IPR001362 GO:0004553|GO:0005975
Apr9g0292 577 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 34 570 - -
Apr9g0292 577 Pfam Glycosyl hydrolases family 32 N-terminal domain 45 366 IPR013148 -
Apr9g0292 577 Gene3D Glycosyl hydrolase domain; family 43 49 379 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0292 Apr-Chr9 3811825 3814606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0292 55 568 Glycoside Hydrolase AT1G55120 55.344 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0292 K01193 - gmx:100777487 1049.65