Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0275 ATGAAGCTTTGGTGTTGTCTATGTTTCACCTTAGAAGAAGAAGAAGAAGAAGAAGAGCGTAATCTTCCCAAGCATATGAAGGAGGAGGACATTTTCGGAAACGACGTCGTCGTCGCCGCCGTGCCTGACGCCGACGGTGATTCCGGAGATGATGAGCTTGATGAGATGGTTAGGGTTATGTCTGCTCCTGTGAACGCGTTCGGGTCGTGGCCCGTCACGCGCCTCTCCGAGGGAGAGAGCAGCTCCGCCGCCAGCTTGGAAAGTGCCGCCGTTGATGAGAGTCGTGATTTGAGCCACAAACGCGCCAAGTTCTACACTGATTTTGATGAGCGTCACTTTGCCAATTCGGCATCTTCGAATACTGGGAAATGCAGTGTGTCTGCTGAGTATGGTGATTATGATTATGTTCAAGGCTCTTCTCTTCGAAACAGTGACACTTGTTATGATGCTTTTACATTGATGTGTTCTGGTAAGGAGAGTAACTTTGATTCTAGGTGTGGGAAAGATGATGAAGCATATGATAGTGACATCTCAAATGTTGAAGATGCAGAAGTCAGAATGGATCTCACGGATGACTTGTTGCATATGGTTTTCTCATTTTTGGATCATCCCAATCTGTGCAAAGCTGCCACTGTTTGTAAGCAGTGGCGAACTGCTAGTGCTCATGAAGATTTCTGGAAGAGCTTGAATTTTGAAGATCGTAACATATCTGTAGAACAATTTGAGGACATGTGTAGGCGTTATCCTAATGCCACTGCAATGAGCATATCTGGTCCTTCTATTTATATGCTTGTCATGAAGGCTATCTCTTCATTAAGGAACCTTGAGGTTCTAACATTAGGAAGAGGACAAATAGCAGATACTTTTTTCCATGCTTTAGCTGATTGTTCTATGTTGAAAAGATTGAATATCAATGATTCTACACTTGGAAATGGCATTCAGGAGATATCTATTAATCATGACAGATTATGTCATCTTCAATTAACAAAATGCCGCGTGATGCGAATAGCTGTCAGATGCCCACAGCTTGAAACTATGTCATTGAAGCGCAGTAACATGGCACAGGTTGTGCTTAATTGCCCTCTTTTGCATGAGCTTGATATAGGCTCTTGCCACAAACTTCCTGATGCTGCAATACGTGCTGCTGCAACTTCATGCCCTCAACTAGTGTCACTGGACATGTCTAATTGCTCATGTGTCAGTGATGAAACTTTGCGTGAAATAGCACAAAGTTGTGCTAACCTTAGTTTTCTTGATGCATCATACTGTCCTAATATATCTTTGGAGTCTGTTAGACTGCCAATGCTGACAGTTCTAAAACTTCATAGTTGTGAGGGCATCACTTCTGCCTCAATGGCTGCAATAGCTCATAGTTATATGTTGGAGGTTCTGGAGCTTGACAATTGCAGTCTTTTGACTTCAGTGTCTTTGGATCTTCCACGTTTGCAGAATATTAGATTGGTACACTGCCGCAAGTTTGCTGATTTGAACTTGAGGACTGTGATGCTTTCTTCTATACTGGTCTCTAACTGCCCTGCACTCCACCGTATCAACATCACTTCAAACTCACTGCAAAAGTTAGCATTGCAAAAGCAGGATAGCTTAACCACATTAGCTCTGCAATGTCAATCTTTACAAGAAGTAGACCTCTCTGAGTGTGAATCTTTGACAAACTCGATATGTGATGTTTTTAGTGACGGTGGAGGATGCCCTACGTTGAAATCACTAGTTCTTGATAATTGTGAGAGCTTGACATCAGTTCGGTTCATAAGCACCTCATTAGTCAGTCTTTCCCTTGGTGGTTGCCGGGCAATTACTACCCTTGATCTCACATGCCCCAATCTTGAGAAAGTCATTTTGGATGGTTGTGATCATTTGGAAAGAGCATCATTTTGTCCTGTTGGTCTTCGTTCTCTCAATTTAGGAATATGTCCAAAACTGAACATACTCAGCGTAGAAGCAATGTTTATGGTCTCACTTGAGTTGAAAGGATGTGGCGTGCTATCTGAAGCATCCCTTAATTGTCCACTCTTGACATCTCTTGATGCTTCCTTTTGCAGCCAACTCACTGATGAATGCTTGGCTGCAACAACGACCTTGTGCCCACTGATTGAGTCATTAATATTGATGTCATGCCCATCAATTGGTTTTAATGGACTTTGTTCTTTGCGTCGGCTCCCAAATTTGACTCTGCTTGATTTATCGTACACCTTCTTGGTGAATTTGCAGCCTGTTTTTGAGTCCTGTTCACAGCTTAAGGTATTAAAGTTGCAGGCATGTAAATATCTCACAGACTCGTCACTTGAACCCCTTTATAAAGGGGGTGCTTTACCGGAACTTAAGGAGTTGGACTTGTCTTATGTAACACTCTGTCAGTCTGCCATAGAGGAGCTTCTTTCTTGCTGCACACACCTTACACATGTGAGCTTGAATGGCTGTGTGAATATGCATGATTTAAACTGGGGATGCAGTCGAGGGAAGGTTGCTGAATTACCCGGTGTAAACATCCTATCCATTGCTAGTTCCCATGAGAATGCCCATGAGTTGAGTGAGCAACCCACCCGATTACTGCAGAACCTGAACTGTGTGGGATGTCCAAATATTCGGAAGGTTTATATCCCATCAACAGCACATTGTTCCCATTTGTTGGTTTTAAACCTTTCTCTATCGGCTAATTTGAAGGAGGTTGATATAGCTTGTCTCAACCTATGCGGGCTTATTTTAAGCAATTGTTCTTCTTTGGAAGTTTTGAAGCTAGAGTGTCCAAGGTTGACCAGTTTACTCCTTCAGTCTTGCAATATTGATGAGGAAGCTGTTGAAGCTGCTATATCAAAATGCACTATGCTGGAAACTCTTGATGTTCGCTTTTGTCCAAAGATAAGCTCAATCAGCATGGGAAGATTGCGCGCATCATGTTCCAGTTTGAAGCGCATATTCAGCAGCTTGTCAACTTCATGA 2958 0.4283 MKLWCCLCFTLEEEEEEEERNLPKHMKEEDIFGNDVVVAAVPDADGDSGDDELDEMVRVMSAPVNAFGSWPVTRLSEGESSSAASLESAAVDESRDLSHKRAKFYTDFDERHFANSASSNTGKCSVSAEYGDYDYVQGSSLRNSDTCYDAFTLMCSGKESNFDSRCGKDDEAYDSDISNVEDAEVRMDLTDDLLHMVFSFLDHPNLCKAATVCKQWRTASAHEDFWKSLNFEDRNISVEQFEDMCRRYPNATAMSISGPSIYMLVMKAISSLRNLEVLTLGRGQIADTFFHALADCSMLKRLNINDSTLGNGIQEISINHDRLCHLQLTKCRVMRIAVRCPQLETMSLKRSNMAQVVLNCPLLHELDIGSCHKLPDAAIRAAATSCPQLVSLDMSNCSCVSDETLREIAQSCANLSFLDASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAIAHSYMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFADLNLRTVMLSSILVSNCPALHRINITSNSLQKLALQKQDSLTTLALQCQSLQEVDLSECESLTNSICDVFSDGGGCPTLKSLVLDNCESLTSVRFISTSLVSLSLGGCRAITTLDLTCPNLEKVILDGCDHLERASFCPVGLRSLNLGICPKLNILSVEAMFMVSLELKGCGVLSEASLNCPLLTSLDASFCSQLTDECLAATTTLCPLIESLILMSCPSIGFNGLCSLRRLPNLTLLDLSYTFLVNLQPVFESCSQLKVLKLQACKYLTDSSLEPLYKGGALPELKELDLSYVTLCQSAIEELLSCCTHLTHVSLNGCVNMHDLNWGCSRGKVAELPGVNILSIASSHENAHELSEQPTRLLQNLNCVGCPNIRKVYIPSTAHCSHLLVLNLSLSANLKEVDIACLNLCGLILSNCSSLEVLKLECPRLTSLLLQSCNIDEEAVEAAISKCTMLETLDVRFCPKISSISMGRLRASCSSLKRIFSSLSTS* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0275 985 Gene3D Ribonuclease Inhibitor 182 429 IPR032675 -
Apr9g0275 985 SUPERFAMILY F-box domain 188 219 IPR036047 GO:0005515
Apr9g0275 985 Gene3D Ribonuclease Inhibitor 509 633 IPR032675 -
Apr9g0275 985 Gene3D Ribonuclease Inhibitor 834 983 IPR032675 -
Apr9g0275 985 SMART fbox_2 189 229 IPR001810 GO:0005515
Apr9g0275 985 PANTHER OS10G0396666 PROTEIN 92 946 - -
Apr9g0275 985 SMART LRR_CC_2 946 971 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 749 774 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 675 700 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 296 319 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 921 945 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 433 458 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 542 566 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 570 600 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 612 637 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 386 411 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 701 726 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 479 504 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 802 842 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 777 801 IPR006553 -
Apr9g0275 985 SMART LRR_CC_2 360 385 IPR006553 -
Apr9g0275 985 SUPERFAMILY RNI-like 412 652 - -
Apr9g0275 985 SUPERFAMILY RNI-like 636 979 - -
Apr9g0275 985 ProSiteProfiles F-box domain profile. 183 229 IPR001810 GO:0005515
Apr9g0275 985 Gene3D Ribonuclease Inhibitor 430 508 IPR032675 -
Apr9g0275 985 Gene3D Ribonuclease Inhibitor 743 833 IPR032675 -
Apr9g0275 985 Gene3D Ribonuclease Inhibitor 645 742 IPR032675 -
Apr9g0275 985 PANTHER OS10G0396666 PROTEIN 92 946 IPR044703 GO:0010252|GO:1905393
Apr9g0275 985 Pfam F-box-like 191 231 IPR001810 GO:0005515
Apr9g0275 985 SUPERFAMILY RNI-like 211 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0275 Apr-Chr9 3630000 3637538 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0275 - - gmx:100782842 1620.52