Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0272 ATGGGTGAGGCTCCACAAGTGTTCTACATTAATGGGTTCTCAAAGTTTGGCCATGAAACCCAACAAAACCACCTTAATGATACCCATGATTCTTCCTGGTACGAGGAAATCATCGATGATGATCTCAAATGGTCTTTTAAACTCAACAGTGTGCCCCATAAAGCAATTAGCCAGTACCAGGACATAGCTCTCTTAGATACAAAGCGTTTTGGAAAGGCCTTGGTGCTTGATGGGAAGATGCAGAGTGCTGAAACGGATGAATTCATTTATCACGAATGCTTGATTCATCCTCCTCTTTTATGTCACCCCAATCCCAAGACAGTGTTTATAATGGGAGGAGGTGAAGGTTCCTCAGCTAGGGAAGCCCTCAAGCACATGTCAATGGACAGAGTGGTCATGTGCGACATAGACAAGGAGGTGGTAGATTTCTGCCGAAAATACTTGATTGCAAATAGGGAGGCATTTTCTCATAAGAAGCTCGATCTTGTCATCAATGATGCCAAGGCCGAACTGGAGAAGAGAAAGGACAAGTTCGATATCATTGTTGGAGATTTGGCAGACCCACTTGAAGATGGGCCTTGCTATCAACTCTATACCCAATCCTTCTATGAGAAAACCCTGAAGCCCAGACTCAATGATAATGGCATTTTTGTGACCCAGGCAGGACCGGCAGGCATCTTCACACACAAGGAGGTCTTCACTTCTATATATAACACAATCAAACAGGTCTTCAAATATGTGATTGCATACACTACTCATGTACCATCATTTGCCGACACATGGGGATGGGTTATGGCTTCAGACCACCCACTGTCGATTGGAGCTGAAGAAATGGACAAAAGAATTGAAGCAAGAATAGATGGGGAACTGCTCTATCTAAACGGTGCTTGGTTCCATTCATCTATGACTATGAATAAAACTGTTTCCCAATCGCTTCAGAATGAAACTCACGTGTACACCGAAGAAAATGCTAGATTTTTACCTGGACATGGCATGGCCTTTCGTCTCTAA 1011 0.4352 MGEAPQVFYINGFSKFGHETQQNHLNDTHDSSWYEEIIDDDLKWSFKLNSVPHKAISQYQDIALLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPPLLCHPNPKTVFIMGGGEGSSAREALKHMSMDRVVMCDIDKEVVDFCRKYLIANREAFSHKKLDLVINDAKAELEKRKDKFDIIVGDLADPLEDGPCYQLYTQSFYEKTLKPRLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASDHPLSIGAEEMDKRIEARIDGELLYLNGAWFHSSMTMNKTVSQSLQNETHVYTEENARFLPGHGMAFRL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0272 336 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 31 268 IPR030374 -
Apr9g0272 336 Pfam Spermidine synthase tetramerisation domain 33 84 IPR035246 -
Apr9g0272 336 Gene3D Vaccinia Virus protein VP39 84 335 IPR029063 -
Apr9g0272 336 Hamap Polyamine aminopropyltransferase [speE]. 32 313 IPR001045 GO:0003824
Apr9g0272 336 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 1 335 - -
Apr9g0272 336 Gene3D Spermidine synthase, tetramerisation domain 31 83 IPR037163 -
Apr9g0272 336 CDD AdoMet_MTases 112 220 - -
Apr9g0272 336 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 32 312 IPR029063 -
Apr9g0272 336 Pfam Spermine/spermidine synthase domain 87 266 - -
Apr9g0272 336 PANTHER BNAA02G04280D PROTEIN 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0272 Apr-Chr9 3551292 3555471 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0272 K18787 - gmx:100784972 643.654