Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0271 ATGGCTTCTGCTTGTGTTTCAATGGTTTCGCCACTCAGCTCTCCCACCCAAAACAGGTTAAACCTTCAACCCTTCAAAGCCTTCTTGAGGCCATTACCCTTTCCACAACCAAAGAGAACCGCTGTTAAAAGGTCACTGCCAAAACCCAAGCTTGGAATTGAAGCGTCTATGAAGGAAAAAGCAGTGAAAGGCCTGACAACCGCTGTAATAGCATCCTACATGTTGATGCCAGAAGTGGTTCATGCAGCTGGAAATGATTTTTCTCCATCTCTCAAAAACTTTTTGCTTAGCATTGTGGCTGGTGGAGTTGTGCTTGCAGCAATATTTGCTGCTGTTATAGGAGTTGCCAACTTTGATCCAGTTAAGAGAGCTTGA 375 0.4453 MASACVSMVSPLSSPTQNRLNLQPFKAFLRPLPFPQPKRTAVKRSLPKPKLGIEASMKEKAVKGLTTAVIASYMLMPEVVHAAGNDFSPSLKNFLLSIVAGGVVLAAIFAAVIGVANFDPVKRA* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0271 124 Pfam Photosystem II reaction centre X protein (PsbX) 88 123 IPR009518 GO:0009523|GO:0015979|GO:0016020
Apr9g0271 124 Gene3D Single helix bin 87 124 - -
Apr9g0271 124 PANTHER OS07G0673550 PROTEIN 2 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0271 Apr-Chr9 3550067 3551255 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0271 - - mtr:MTR_1g015290 144.821