Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0266 ATGGATTTCAGGGTGGTGGGTTTGGAGTCTCCGTTGTTTCACGCGCTGCAGCATGTGATGGACTTTCCAGACGACGCTGCAGGGGACAAAACACACAATGCTCCGACCAGAACATACGTCAGAGATGCGAAGGCGATGGCTACAACCCCTGCGGATGTGAAGGAGTCTCCGAATTCTTACGTGTTCGTGATCGACATGCCGGGTTTGAAATCAGAGGACATAAAGGTTCAGTTGGAAGATGACAATGTGCTTCTCATAAACGGAGAGAGGAAGAGAGAGGAAGAGAGAGAAGGTTCCAAGTATTTGAGAATGGAAAGAAGGGTTGGCAAATTCATGCGCAAGTTCGTGCTCCCTGACAATGCTAACACTGATGCTATTTCTGCTGTGTGCCAAGACGGGGTTCTCAGTGTCACTGTTCAGAAGTTGCCTCCTCCTCAACCTAAGAAACCAAAAACTATTGAGGTTAAGGTTGCTTGA 477 0.4822 MDFRVVGLESPLFHALQHVMDFPDDAAGDKTHNAPTRTYVRDAKAMATTPADVKESPNSYVFVIDMPGLKSEDIKVQLEDDNVLLINGERKREEEREGSKYLRMERRVGKFMRKFVLPDNANTDAISAVCQDGVLSVTVQKLPPPQPKKPKTIEVKVA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0266 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Apr9g0266 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 158 IPR002068 -
Apr9g0266 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 157 - -
Apr9g0266 158 Gene3D - 9 157 IPR008978 -
Apr9g0266 158 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 157 - -
Apr9g0266 158 SUPERFAMILY HSP20-like chaperones 29 150 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0266 Apr-Chr9 3489793 3491728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0266 K13993 - gmx:100500503 248.054