Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0239 ATGGCTTTGGCCAACCCATTTTCGCTGGCTTTGCCTTCAACGATGCCATGCAAACACAACTCTTCAATAGTGCCACTTTGCACTCTAACTTCTCAACCATTTAAACTTAGACCATTATCATTTACATTCAGGAAAAAGCAGCATCACATGTGTGGTGCCCTCAAAGGTGCACCTTTGGTTGATCACAAAGATGGGGAGGATCAGAAGGTTGTTCTTGTTGACCTTTCCAGTGAAGAGGGGCAGAAAGATGAGAAGGTGGTTGTAGAATATGATTGGACACAAGAATGGTACCCTTTGTACCTTACTCATGATGTGCCTGATGATGCACCGCTTGGTCTCAAAGTGTTTGACAAGCAACTAGTTTTGTTCAAAGATGGCAATGGAAAGCTTAACTGTTATGAAGATCGCTGCCCTCATAGGTTAGCAAAGCTATCAGAAGGCCAGTTGATTGATGGAAGGCTTGAGTGCCTATACCATGGATGGCAATTTGAAGGTGAAGGCAAATGTGTGAAGATACCTCAGCTTCCAGCTGATGCTAAAATCCCTCGATCTGCCTGTGTTAAAACATATGAGGTGAGAGATTCTCAAGGAGTTGTGTGGGTATGGATGTCTCAAAAGACAACTCCAAATGTTGATAAAATACCTTGGTTTGAGAACTTTGCAAGGCCAGGATTTCAAGACATTTCAACAGTTCATGAACTCCCATATGATCACTCTATTCTTCTAGAAAATCTGATGGATCCTGCTCATATCCCAATCTCACATGATAGAACAGATATGAGTGCAAAAAGAGAGGATGCACAGCCACTTTGTTTTGAGGTGACTGAAAGAACTGATAGAGGTTTTGCAGGTTGGTGGGGCAAAGAGAAAGATGGATCTATGCCTAACCGTTTAAGGTTTGAAGCTCCTTGTGTTCTTCAAAACAACATAGAAATTGTTGATAAAAGTGGTGAAAAACACTACTTCAGTGGTTTGTTCCTATGTAGACCAACTGGACAAGGGAAATCCATGTTGATAGTGAGGTTTGGAGGAACAAAAAGTTTTCCACTATCAAAACTGTTCCCCAAATGGTATCTCCATCAAAATGCAAGCAAAGTGTTTGAGCAAGACATGGGGTTCTTATCATCCCAAAATGAAACTTTGATAAAAGAAAAGGTCCCCACAAAGGAACTATACTTTAATCTAAGATCATCAGATACATGGGTTGCTGAATACAGAAAGTGGATGGACAAAGTTGGGAATGGAATGCCATATCATTTTGGTCACAACACTATTTCCTTACCAAAAGAACCTGCAGTGGTTGAGCATGCACCTGCTGGACTCATTGCAGGAATGTCAGCTGCTTCACCTGCTAAGGGAGGCATTGGTGAAATGCATGCTCCTAATTTAGCCAATAGATATTTTAGACATGTCATACATTGCAAAGAGTGTAGAAGTGCATTGAAAGCTTTTCAATCTTGGAAAAATATTTTTTCAGCTATAGCAGTTGGATTGGTGGCATTGGCAATTGTGGTGTCTGGGACACATTGGAAAGCCCTTCTATTGGTATCTGCATCCCTTTGCTCAGTTGGAGTCTATGCTTGCTCAACTGCTATTGCTATGGCTACATCGAACTTTATTAGGACTCATAGGAGATTGTGA 1641 0.4126 MALANPFSLALPSTMPCKHNSSIVPLCTLTSQPFKLRPLSFTFRKKQHHMCGALKGAPLVDHKDGEDQKVVLVDLSSEEGQKDEKVVVEYDWTQEWYPLYLTHDVPDDAPLGLKVFDKQLVLFKDGNGKLNCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVRDSQGVVWVWMSQKTTPNVDKIPWFENFARPGFQDISTVHELPYDHSILLENLMDPAHIPISHDRTDMSAKREDAQPLCFEVTERTDRGFAGWWGKEKDGSMPNRLRFEAPCVLQNNIEIVDKSGEKHYFSGLFLCRPTGQGKSMLIVRFGGTKSFPLSKLFPKWYLHQNASKVFEQDMGFLSSQNETLIKEKVPTKELYFNLRSSDTWVAEYRKWMDKVGNGMPYHFGHNTISLPKEPAVVEHAPAGLIAGMSAASPAKGGIGEMHAPNLANRYFRHVIHCKECRSALKAFQSWKNIFSAIAVGLVALAIVVSGTHWKALLLVSASLCSVGVYACSTAIAMATSNFIRTHRRL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0239 546 SUPERFAMILY ISP domain 88 210 IPR036922 GO:0051537
Apr9g0239 546 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 59 546 - -
Apr9g0239 546 Gene3D - 91 220 IPR036922 GO:0051537
Apr9g0239 546 Gene3D - 223 414 - -
Apr9g0239 546 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 96 201 IPR017941 GO:0051537
Apr9g0239 546 SUPERFAMILY Bet v1-like 197 415 - -
Apr9g0239 546 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 59 546 - -
Apr9g0239 546 Pfam Pheophorbide a oxygenase 300 384 IPR013626 GO:0010277
Apr9g0239 546 Pfam Rieske [2Fe-2S] domain 95 177 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0239 Apr-Chr9 3088825 3092009 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0239 - - gmx:100818625 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0239 9 3088825 3092009 Apr9g0239 9 3088825 3092009 ECH