Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr9g0224 | ATGTCGTCTTCGGAATCCCAAGAACCCGCGCTTTCGTCGGAAACACAGATAAGCAAAAAAGCCGCTAAGAAGGAAGCCGCAAAGCAAGACAAGCTCCGCCGCCGTCAGGAAGTCGCCGCCGCCACCACCGCCGCCGCCAACCTCTCAGTCGACGAGACTGACCCCCTCGCCGGAAACTACGGTGATGTGCCGTTGGTGGAGCTGCAGTCGAAGACTCCGGTGGACGTCAGCGCATGGACGCGCGTGGAGTCTCTGGCCGATTGTCTCTCGAACCGCACGGTCCTGATCCGAGGGAGAGCGCAGACGATTCGACCGGTGGGGAAGAAAATGGCGTTCTTGGTGATCAGAGAGAACGGTTTCACGGTGCAGTGCTTAGTGCAGGCGCAGGCCGATACGGTGAGCCCGCAGATGGTGAAGTTCGCTGCCGCACTCAGCCGCGAGTCTATCGTTGACGTTGAAGGCGTCGTTTCGATTCCCACATCTCCAATCAAAGGCGCTACGCAGCAGGTGGAAATTCAAGTGAGGAAGTTGTACTGTGTGAGTAGGGCTGTCTCTACTCTACCGATTAATCTTGAGGATGCTGCAAGGAGTGAAGCTGAAATTGAGAAGGCTCTTCAGGCTGGTGAACAACTCGTTCGTGTTAATCAGGACACACGATTGAATTTTAGAGTACTTGACGTGCGAACACCAGCTAATCAAGGAATTTTCCGCATTCAGTCTCAAGTTGGAAATGCATTTAGACAATTCTTATTGTCTGAAGGTTTTTTTGAAATCCACACTCCAAAGTTGATTGCCGGATCTAGTGAGGGTGGAGCTGCCGTTTTTAGATTGGACTACAAAGGCCATCCTGCCTGCCTGGCTCAGTCACCCCAGCTTCACAAGCAGATGTCAATATGTGGTGATTTTGGCCGTGTTTTTGAGATTGGTCCTGTGTTTAGAGCGGAAGATTCCTTCACTCACAGACATCTGTGCGAGTTTACTGGTCTCGATGTTGAAATGGAGATTAAGAAGCATTATTTTGAGGTGATGGATATAGTTGATAGATTATTTGTCGCTATGTTTGACAGTTTGAACCATCATTGTAAGAAGGATCTGGAAGCTGTGGGGTCTCAGTACCCATTTGAACCTTTGAAGTATCTGCGACAAACTCTGCGGCTAACATATGAAGAAGGGGTTCAGATGCTCAAGGATGCTGGAATAGAAATTGAACCTTTTGGTGACTTGAATACTGAAGCGGAAAGGAAATTGGGCCAGCTAGTTTTAGAGAAATATGGCACAGAGTTCTATATCCTTTATCGGTACCCTTTGGCTGTAAGGCCATTTTATACGATGCCCTGCTATGACAATCCAGCATACAGTAACTCCTTTGATGTCTTTATTAGAGGTGAGGAGATAATTTCAGGAGCTCAGCGTGTTCATGTGCCAGAATTTTTGGAACAACGTGCAGCAGCTTGTGGCATTGATGTCAAGACAATATCTACATATATTGATTCTTTCAGATATGGTGCACCGCCACATGGTGGCTTTGGAGTAGGTTTGGAGCGTGTAGTAATGCTCTTCTGTGGCCTAAATAATATTCGCAAAACATCGCTTTTCCCTCGTGACCCACTTAGGATTGCACCATGA | 1626 | 0.4822 | MSSSESQEPALSSETQISKKAAKKEAAKQDKLRRRQEVAAATTAAANLSVDETDPLAGNYGDVPLVELQSKTPVDVSAWTRVESLADCLSNRTVLIRGRAQTIRPVGKKMAFLVIRENGFTVQCLVQAQADTVSPQMVKFAAALSRESIVDVEGVVSIPTSPIKGATQQVEIQVRKLYCVSRAVSTLPINLEDAARSEAEIEKALQAGEQLVRVNQDTRLNFRVLDVRTPANQGIFRIQSQVGNAFRQFLLSEGFFEIHTPKLIAGSSEGGAAVFRLDYKGHPACLAQSPQLHKQMSICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKKHYFEVMDIVDRLFVAMFDSLNHHCKKDLEAVGSQYPFEPLKYLRQTLRLTYEEGVQMLKDAGIEIEPFGDLNTEAERKLGQLVLEKYGTEFYILYRYPLAVRPFYTMPCYDNPAYSNSFDVFIRGEEIISGAQRVHVPEFLEQRAAACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLFPRDPLRIAP* | 542 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr9g0224 | 541 | CDD | AspRS_cyto_N | 93 | 193 | - | - | |
| Apr9g0224 | 541 | PANTHER | ASPARTYL-TRNA SYNTHETASE | 11 | 541 | IPR004523 | GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 | |
| Apr9g0224 | 541 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
| Apr9g0224 | 541 | Pfam | tRNA synthetases class II (D, K and N) | 216 | 535 | IPR004364 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Apr9g0224 | 541 | CDD | AsxRS_core | 213 | 536 | - | - | |
| Apr9g0224 | 541 | Gene3D | Bira Bifunctional Protein; Domain 2 | 188 | 541 | IPR045864 | - | |
| Apr9g0224 | 541 | PRINTS | Aspartyl-tRNA synthetase signature | 286 | 298 | IPR002312 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Apr9g0224 | 541 | PRINTS | Aspartyl-tRNA synthetase signature | 303 | 316 | IPR002312 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Apr9g0224 | 541 | PRINTS | Aspartyl-tRNA synthetase signature | 456 | 472 | IPR002312 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Apr9g0224 | 541 | PRINTS | Aspartyl-tRNA synthetase signature | 496 | 510 | IPR002312 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Apr9g0224 | 541 | SUPERFAMILY | Class II aaRS and biotin synthetases | 211 | 538 | IPR045864 | - | |
| Apr9g0224 | 541 | Gene3D | - | 57 | 185 | IPR012340 | - | |
| Apr9g0224 | 541 | ProSiteProfiles | Aminoacyl-transfer RNA synthetases class-II family profile. | 236 | 533 | IPR006195 | - | |
| Apr9g0224 | 541 | Hamap | Aspartate--tRNA(Asp) ligase [aspS]. | 77 | 541 | IPR004523 | GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 | |
| Apr9g0224 | 541 | PANTHER | ASPARTATE--TRNA LIGASE, CYTOPLASMIC | 11 | 541 | - | - | |
| Apr9g0224 | 541 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Apr9g0224 | 541 | MobiDBLite | consensus disorder prediction | 18 | 37 | - | - | |
| Apr9g0224 | 541 | SUPERFAMILY | Nucleic acid-binding proteins | 58 | 185 | IPR012340 | - | |
| Apr9g0224 | 541 | TIGRFAM | aspS_nondisc: aspartate--tRNA(Asn) ligase | 90 | 541 | IPR004523 | GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr9g0224 | K22503 | - | gmx:100788164 | 973 |
Event-related genes