Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0210 ATGTCAACAAAACCCACGAGTTGGCACATATATATACACATTCAATTAACCACCTTTTTGGCACATTCCCATTCTCTTATGATCAACATGGCCCTCCAAAGGCAAATTATCACACCCCTTTTGGTTATATTCATGATCCTCCACTCTTATGCACTTCATGAACCTTCTAATTGGGAATATGAACCAAGTAGAGGTAGTGTCAGAGCTGCATATTGGCCTTCGGGGAGTGATTTTTCACCCTCTTCTATTGACACAAAGTACTTCACTCACATCTATTATGCCTTCATAGAACCCGACCCACTATTTTTCAACCTTAATGTCACCGAGTTTCATAAAAAATGGATACCTAACTTCATCAACGGGCTCCGCTACCGTCACCCGCCTGTGAAAACTCTTCTGTCAATTGGGGGAGGTGGCAGCAATTCAACCGCGTTCTCTCTCATGGCTAGCACCAAGCAAAATCGTCAAGTTTTCATAAAATCCACCATCCACGTGGCACGCGAATACGGGTTCAACGGTCTTGATTTGGATTGGGAGTTCCCAGAAACTGAACTTGATATGTCTAACCTTGGTCTATTGTTTCAAGAGTGGCACCAAGCGTTGGTGGTGGAAGCTCAAATTCAGAGAAAACCGCGTTTGCTTTTGACTTCTGCGGTGTACTATGCTTCCACAATTAAGCTTATTGGTAATGGGCCTAGATCATACCCGGCCCAAGCCATTACCAAGTACTTGGATTGGGCTAGCCCCATGTGCTTTGACTACCATGGTACATGGGCCAATTTTACGGGCTTTAATGCTGCTTTATATGATCCAAATTCTAATATAAGTACCCGCTATGGGATCGGGTTGTGGATCGAATCTGGTGTGCCACCCGAAAAGCTGGTCATGGGCTTACCATTATACGGGCGGGCATGGAAGCTCCAGGATCCGAATGTACATGGGGTTGGGGCTGAAGCGGTTGGTGAAGCCACTGATACGGATGGTACTATGGACTACGATGAAATTTTGGTGTTCAACAAAGATAATGGTGCCAATGTTGTGTATGATGAGGTGGCTGTGTCATTCTACTCTTATGCGGATACTACTTGGATCGGGTATGATGATGGACCCTCCATTACGAAGAAGGTTCGGTTTGCTAAGTCAAAGGGCTTGAAGGGCTATTTCTTTTGGGCTATTGGGAAGGACAAGGATTGGACCATCTCAAGACAAGCTTCGAATACATGGGGACACTGA 1233 0.4517 MSTKPTSWHIYIHIQLTTFLAHSHSLMINMALQRQIITPLLVIFMILHSYALHEPSNWEYEPSRGSVRAAYWPSGSDFSPSSIDTKYFTHIYYAFIEPDPLFFNLNVTEFHKKWIPNFINGLRYRHPPVKTLLSIGGGGSNSTAFSLMASTKQNRQVFIKSTIHVAREYGFNGLDLDWEFPETELDMSNLGLLFQEWHQALVVEAQIQRKPRLLLTSAVYYASTIKLIGNGPRSYPAQAITKYLDWASPMCFDYHGTWANFTGFNAALYDPNSNISTRYGIGLWIESGVPPEKLVMGLPLYGRAWKLQDPNVHGVGAEAVGEATDTDGTMDYDEILVFNKDNGANVVYDEVAVSFYSYADTTWIGYDDGPSITKKVRFAKSKGLKGYFFWAIGKDKDWTISRQASNTWGH* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0210 410 SUPERFAMILY (Trans)glycosidases 67 405 IPR017853 -
Apr9g0210 410 PANTHER CHITINASE 53 409 - -
Apr9g0210 410 Gene3D Glycosidases 81 396 - -
Apr9g0210 410 Gene3D - 300 366 IPR029070 -
Apr9g0210 410 SUPERFAMILY Chitinase insertion domain 301 366 IPR029070 -
Apr9g0210 410 SMART 2g34 66 395 IPR011583 GO:0008061
Apr9g0210 410 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 171 179 IPR001579 GO:0004553|GO:0005975
Apr9g0210 410 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 66 410 IPR001223 GO:0005975
Apr9g0210 410 CDD GH18_plant_chitinase_class_V 67 401 - -
Apr9g0210 410 Pfam Glycosyl hydrolases family 18 69 395 IPR001223 GO:0005975
Apr9g0210 410 PANTHER CLASS V CHITINASE CHIT5A 53 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0210 Apr-Chr9 2715051 2717278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0210 67 408 Glycoside Hydrolase AT4G19810 43.605 1.00e-96 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0210 K01183 - gmx:100787511 669.463