Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0204 ATGGCTTCTTCGCTTCTCTCCGTAACTTCTCCCTCTTCTTCTCTCTCCATTCACCATATCCACAAGGGAAGACCCAAGCTTGGAGGCAACGCTTTAAGGCTTAAGAATTCAAGGTCCTGTGGTCGGTTCTCTATGGCTGTTGCGGTTAATGTTTCTCGATTTGAGGGCATACCTATGGCTCCTCCTGATCCAATTCTTGGAGTTTCTGAAGCATTTAAAGCAGACACAAGTGATGTTAAGCTCAATCTTGGAGTTGGGGCCTATAGAACAGAAGAACTACAGCCATATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCTTATGCTGGAGAGAGGTGATAACAAAGAGTATCTCCCCATTGAGGGTTTGGCTGCATTTAATAAAGCTACTGCAGAGTTGTTGCTTGGAGCAGACAACCCAGCAATCAAAGAGCAAAGAGTTGCCACTGTTCAAGGTCTTTCTGGAACTGGTTCTCTGAGACTAGGTGCAGCTCTGATAGAACGATATTTTCCTGGAGCAAAAGTTTTGATATCGGCACCTACCTGGGGTAATCACAAGAATATTTTCAACGATGCTAGAGTCCCATGGTCTGAGTACCGATATTATGATCCTAAGACAGTCGGCCTGGATTTTGAGGGCATGATTGAAGATATAAAGTCATCTCCCGATGGAACTTTTGTGCTACTTCATGGATGTGCTCATAACCCTACTGGTATTGATCCAACCCCTGAGCAGTGGGAAACAATAGCTGATGTAATTCAAGAAAAGAACCACATTCCTTTTTTTGATGTTGCTTACCAGGGATTTGCTAGTGGAAGCCTTGATGAAGATGCAGCATCTGTGAGATTGTTTGTGTCACGTGGCATGGAAGTTCTTGTAGCTCAGTCATACAGTAAAAATCTAGGTCTCTATGCTGAAAGGATTGGAGCAATCAATTTAATTTCATCATTACCAGAATCTGCAGCAAGGGTAAAGAGCCAGTTAAAAAGGCTTGCACGACCAATGTACTCCAATCCACCTGTACACGGGGCTAGGATTGTTGCCGATATTGTTGGAAACCCTGCTCTTTTTGATGAATGGAAAGCAGAAATGGAAATGATGGCTGGGAGGATAAAGAATGTTAGACAGCAACTATATGATAGTATTACTTCAAAAGACAATAGTGGAAAAGATTGGTCATTCATACTAAAGCAGATAGGCATGTTCTCATTCACGGGGTTGAACAAGGAGCAGAGTGACAATATGACAAATAAGTGGCACGTATACATGACGAAAGATGGAAGGATTTCCCTGGCAGGATTGTCATTGGCGAAGTGTGAATTCCTTGCCGATGCTATCATTGACTCGTATCATAATGTCAGCTGA 1365 0.4286 MASSLLSVTSPSSSLSIHHIHKGRPKLGGNALRLKNSRSCGRFSMAVAVNVSRFEGIPMAPPDPILGVSEAFKADTSDVKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLLGADNPAIKEQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKSSPDGTFVLLHGCAHNPTGIDPTPEQWETIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFVSRGMEVLVAQSYSKNLGLYAERIGAINLISSLPESAARVKSQLKRLARPMYSNPPVHGARIVADIVGNPALFDEWKAEMEMMAGRIKNVRQQLYDSITSKDNSGKDWSFILKQIGMFSFTGLNKEQSDNMTNKWHVYMTKDGRISLAGLSLAKCEFLADAIIDSYHNVS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0204 454 CDD AAT_like 81 434 - -
Apr9g0204 454 Pfam Aminotransferase class I and II 80 446 IPR004839 GO:0009058|GO:0030170
Apr9g0204 454 PRINTS Aspartate aminotransferase signature 227 246 IPR000796 GO:0006520|GO:0008483
Apr9g0204 454 PRINTS Aspartate aminotransferase signature 258 270 IPR000796 GO:0006520|GO:0008483
Apr9g0204 454 PRINTS Aspartate aminotransferase signature 326 351 IPR000796 GO:0006520|GO:0008483
Apr9g0204 454 PRINTS Aspartate aminotransferase signature 395 413 IPR000796 GO:0006520|GO:0008483
Apr9g0204 454 PANTHER ASPARTATE AMINOTRANSFERASE 13 452 IPR000796 GO:0006520|GO:0008483
Apr9g0204 454 Coils Coil 357 377 - -
Apr9g0204 454 Gene3D Aspartate Aminotransferase, domain 1 57 446 IPR015422 GO:0003824
Apr9g0204 454 PANTHER ASPARTATE AMINOTRANSFERASE, CYTOPLASMIC 13 452 - -
Apr9g0204 454 SUPERFAMILY PLP-dependent transferases 52 448 IPR015424 -
Apr9g0204 454 Gene3D - 112 353 IPR015421 GO:0003824
Apr9g0204 454 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 296 309 IPR004838 GO:0003824|GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0204 Apr-Chr9 2616992 2621040 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0204 K00811 - gmx:547792 815.068