Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0190 ATGCACAATGTCAGCAATTCCGGATCATCTGCATCTGCTCTAACAAATTCAGGAACAACTCTGGAGTTGAAACCTTCAACCAACGAAAGGCCAAGTATGGTTTCTGATCAGAGAGAGTGCAAAAAAGTTTTGAGGGATGTAATACCTAAATCAATTGAAGAATCCTATAACAAATCAAAGAATATGTTTGACATATGTGACCCATCTCAGTGTCAGTTCTTGCAGCTCCATAAGCATCCTGAAGTAAACAAGATTGTTAGACTCACTTACACCAATGCTGGAAATGCCATTTTGGCGTTGGGATCGAATGGTACTCATCTAGTTTGGTTCTGGCCACGCACTAACCTTAACTTGGATGGGAAGGCTAATGCAAAGGTTTACCCTCAACTATGGCAACCAAAAAGTGGCTTTAAATCTATGATCAATGACCTTACAAGCATCAAATGTGGAAATCCAGTTTCCTGTTTTGCTTTATCAAAACAGGATGCATATCTCATTTCAACATCAGGGGGGAAGATCTCCTTGTTCAATATCTTTACATTTAAGACTCTGACAACTGCTATGCCTCCACCACCTATGGTAACAAGTCTTGCCTTCTACCCTGAAGATAATAATATATTTGCTATTGGATTGGATAACTCCACTATACTGATATACTATGTCCTTAAAGATGAGGTTCTTTTCAATCTTGAGGGCCACTCTAAAAGAGTTACTGCTCTTGCCTTCTCAAAAACTTGGAATATTCTTATATCTGGTGATGTAAATGCTCAGATTATTGTATGGAAAACAGAAGGATGGGGAAAGTTGAAAGATAGGTACTTGCAAATACATGGACAGAAGGTGCCAGAAGTACAATCAGAAACTCAAATTCAGTTTCACCCAGATCAGACAAACTTCCTTGCTGTACATGATAGTCATCTTGCAATTTATGAAGCAACAGAACTAAGATGTGTCAAACAGTGGGTTCCAGAAGTTCCAGTTGTTATCTCTCAAGCAACTTTCTCATCTAATGGGCACTCTGTGTATGCCATTTTTGTTGATGGGACTTTGGCAATATTTGAAGCTTCAAATCTTCAAGTGCTTTGTAGGGTCCATCCTTGTGCTTACCTTTCTCCAACTTCTCGTTTGAGCATGTGGCCAATTTCTATAGCTGCACATCCACTGAAACCAACGCAGTTTGCCGTGGGACTCACAGATGGTAGTATTTATGTGTTTGAGCCTCGGGAATTAGGGGGTAATTGGATCAAAACCCAGTGA 1257 0.3986 MHNVSNSGSSASALTNSGTTLELKPSTNERPSMVSDQRECKKVLRDVIPKSIEESYNKSKNMFDICDPSQCQFLQLHKHPEVNKIVRLTYTNAGNAILALGSNGTHLVWFWPRTNLNLDGKANAKVYPQLWQPKSGFKSMINDLTSIKCGNPVSCFALSKQDAYLISTSGGKISLFNIFTFKTLTTAMPPPPMVTSLAFYPEDNNIFAIGLDNSTILIYYVLKDEVLFNLEGHSKRVTALAFSKTWNILISGDVNAQIIVWKTEGWGKLKDRYLQIHGQKVPEVQSETQIQFHPDQTNFLAVHDSHLAIYEATELRCVKQWVPEVPVVISQATFSSNGHSVYAIFVDGTLAIFEASNLQVLCRVHPCAYLSPTSRLSMWPISIAAHPLKPTQFAVGLTDGSIYVFEPRELGGNWIKTQ* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0190 418 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 10 418 IPR027728 GO:0006355
Apr9g0190 418 PANTHER TOPLESS-LIKE PROTEIN 10 418 - -
Apr9g0190 418 ProSiteProfiles Trp-Asp (WD) repeats profile. 230 264 IPR001680 GO:0005515
Apr9g0190 418 SUPERFAMILY WD40 repeat-like 145 407 IPR036322 GO:0005515
Apr9g0190 418 MobiDBLite consensus disorder prediction 1 38 - -
Apr9g0190 418 SMART WD40_4 314 354 IPR001680 GO:0005515
Apr9g0190 418 SMART WD40_4 363 406 IPR001680 GO:0005515
Apr9g0190 418 SMART WD40_4 223 262 IPR001680 GO:0005515
Apr9g0190 418 SMART WD40_4 180 220 IPR001680 GO:0005515
Apr9g0190 418 SMART WD40_4 140 177 IPR001680 GO:0005515
Apr9g0190 418 MobiDBLite consensus disorder prediction 1 33 - -
Apr9g0190 418 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 230 264 - -
Apr9g0190 418 Gene3D - 74 415 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0190 Apr-Chr9 2444188 2448295 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0190 - - vun:114195532 522.702