Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0188 ATGGAGACGTTGCCGACGACGTCGACGGTGAAAAGAGGAGGAAGATCCAAAACCGTGCACACCTCGAAACCTTCCCTCGTCATGGCCTTCTTCTCTTGCGTTGCTTGGCTTTACGTTGCTGGAAGGTTATGGCAAGATGCAGAGAATCGCAATTTACTTACTAGTCTTCTGAAGAAGAATTCAGCTCAGAGGCCTAAGGTTCTTACGGTGGAAGATAAGCTAATGGTTCTAGGATGCCGGGATCTGGAGAGGAGGATCGTGGAAGCTGAGATGGAATTGACATTGGCTAAGAGTCAAGGGTACCTCAAAGGCCAAGGGCAGAAAAGTGGCTCTTCATCTGATCGTAGGCTTCTTGCTGTTATTGGGGTGTATACAGGGTTTGGAAGTCGATTGAAGAGAAATGTTTTCAGGGGGTCTTGGATGCCCAGAGGTGATGCCTTGAAAAAACTTGAAGAAAGAGGAGTGGTCATACGTTTTGTAATTGGTCGGAGTGCTAATCGAGGTGATAGCTTAGATCGTAATATTGATGAGGAAAACCGCTCAACAAAGGATTTCCTGATTCTTGAAGGTCATGAAGAAGCTCAAGAAGAGTTGCCTAAAAAAGCTAAAATCTTCTTTAGTACTGCAGTTCAGAACTGGGATGCTAACTTTTATGTGAAAGTTGATGACAATATTGACATTGATCTAGAGGGTTTAATTGAACTTCTTGAACGTCGGCGTGACCAGGATGGGGCATATATCGGATGCATGAAGTCAGGAGATGTGATATCAGAAGAGGGAAAACCATGGTATGAACCTGAATGGTGGAAATTTGGAGATGAGAAAGCGTATTTCCGACATGCCGCTGGTTCACTTGTTATAATTTCAAAGAATTTAGCACAATACATTAATATAAACAGTGTATCTTTGAAGACCTATGCCTTCGATGATACATCGTTGGGATCATGGATGATGGGAATCCAAGCAACTTATATAGATGACAGTCGCCTTTGCTGCAGTAGTATCAGTAAAGACAAGGTATGCTCCTTGGCTTGA 1035 0.4338 METLPTTSTVKRGGRSKTVHTSKPSLVMAFFSCVAWLYVAGRLWQDAENRNLLTSLLKKNSAQRPKVLTVEDKLMVLGCRDLERRIVEAEMELTLAKSQGYLKGQGQKSGSSSDRRLLAVIGVYTGFGSRLKRNVFRGSWMPRGDALKKLEERGVVIRFVIGRSANRGDSLDRNIDEENRSTKDFLILEGHEEAQEELPKKAKIFFSTAVQNWDANFYVKVDDNIDIDLEGLIELLERRRDQDGAYIGCMKSGDVISEEGKPWYEPEWWKFGDEKAYFRHAAGSLVIISKNLAQYININSVSLKTYAFDDTSLGSWMMGIQATYIDDSRLCCSSISKDKVCSLA* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0188 344 Coils Coil 79 99 - -
Apr9g0188 344 Pfam Domain of unknown function (DUF4094) 22 99 IPR025298 -
Apr9g0188 344 Gene3D - 146 331 - -
Apr9g0188 344 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 339 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr9g0188 344 Pfam Galactosyltransferase 132 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr9g0188 344 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT3 3 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0188 Apr-Chr9 2430289 2436463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0188 75 344 Glycosyltransferase AT2G25300 80.741 1.89e-165 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0188 K20854 - gmx:100816327 599.742