Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0179 ATGCGAATGCGTGTTCTTCCCTTCCAAGAATCTCTCTCTCTCTTCTGCTATAAACCTTCGACATCATCGATGCCATTTTCTCACGCAATGGGTGAAGACGAGAGTGCGTTGATAGTGGCAAAGCAGAATAGCCCTAACCGATCCTCTACTTTCGACATCATCGATGCAGTTTTCTCACGCAAATCCTTCTTCTACGATAGGCTTCCCTCCCAACCCCTTAGACTCACTGTACTCAAATTGGACGGATCCTGCTTCCATGTTCAAGTTCCGAAGACGGCAACGATTGCACAACTTAAGGACGCAGTAGAAGCCCTCTTCAGTCACATAGGCCCTTCACAAATTTCATGGCCACTTGTTTGGGGGCAGTTTTGCTTGTGCTATGATGGGCAGAAACTAGTTACAGAGAAGGATTATCTTAGACATTATGGCATCAAGGATGGTGACCAGCTCTATTTCATCCGCCATGTCTCAAACAGTTGCTGCTTCATTCAAAGAAAGAGGTCAAAGAAAAGAATTGTTCGTTTGAAACTGCAGAGGAGGTCATCGCAAGTGAATAGCTATCAACCCAAAGAAAATTGTGATGATGATGAAATTAGTTCTGGTGATGAAACCATAGAGAATGCAAAGATCAAGCATTGCATGGAGGAGGAGGAAGAAGAACATGTTGGAAAGAACAAATTAACTGGCTTTGTGGGAACATTTTTCTCGTACACTCCACTAGCAAGTGTGAGAAAAACTAGAACTAAAAGCAGGATTTGGCCGTCCACAATTCCCAGGTGTTTAACGGGCAGTTTTAGAAAGATCAAAAGCATTGTTTGCTTTGGCAGGAGCCGGCACCAATCTCTCAGACTCACATGGAGACAGTATTAA 870 0.4379 MRMRVLPFQESLSLFCYKPSTSSMPFSHAMGEDESALIVAKQNSPNRSSTFDIIDAVFSRKSFFYDRLPSQPLRLTVLKLDGSCFHVQVPKTATIAQLKDAVEALFSHIGPSQISWPLVWGQFCLCYDGQKLVTEKDYLRHYGIKDGDQLYFIRHVSNSCCFIQRKRSKKRIVRLKLQRRSSQVNSYQPKENCDDDEISSGDETIENAKIKHCMEEEEEEHVGKNKLTGFVGTFFSYTPLASVRKTRTKSRIWPSTIPRCLTGSFRKIKSIVCFGRSRHQSLRLTWRQY* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0179 289 PANTHER - 31 285 - -
Apr9g0179 289 CDD Ubl_SNRNP25 73 155 IPR040610 -
Apr9g0179 289 Pfam Ubiquitin-like domain 73 156 IPR040610 -
Apr9g0179 289 SUPERFAMILY Ubiquitin-like 68 159 IPR029071 -
Apr9g0179 289 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 31 285 IPR039690 GO:0000398|GO:0005689
Apr9g0179 289 ProSiteProfiles Ubiquitin domain profile. 73 159 IPR000626 GO:0005515
Apr9g0179 289 Gene3D - 68 161 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0179 - - aprc:113846519 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0179 9 2316398 2319983 Apr9g0179 9 2316398 2319983 ECH
Apr9g0179 9 2316398 2319983 Apr5g1270 5 17031706 17032609 PCT