Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0178 ATGTCTCTGAAACCGTCGAATTCGTCGGAGAATCCGATACTTCCCATGTCGGATCCTCCCCACAACCAAGACGACGACAAGCTCTTCAAAGGTTCCGCCATGACCAAACGAGGAGCCTTCGCTGCCATCTCTTACATGTCCTGCGCAGGTTCTCTCTCCTCTACCTCTGCATTTTTTTCTCCAATTCTGTTGGTGATGTTCAATAAGGCTGCTCTTTCTTCTTATAACTTTCCATCCGCAAATGTTATAACACTTCTTCAGATGGTATGTTCGTGTTGTTTTCTCTATGTATTAAGGCACTGGAGGGTGATTTCTTTCACAGCAAGCGAATCTTTACTTATGTCAGATAACTCAACAAAGTTTGTATCATTGAAGACTTTGAAGCACACTCTTCCTCTGTCTGGAGCTTATTTACTTTACATGCTAGTCACCATGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTACACCACCCTTAGGAGGACCACAGTGGTATTTACAATGCTGGTAGAGTTTGTTCTGGTAGGGCAGAGATATACACCCTCTGTCATTTTCAGTGTTGGCTTGATTGTCTTTGGTGCATTTGTTGCGGGAGCGCGGGACCTTTCTTTTGATGCTTATGGTTATGCTGTTGTTTTCATGGCTAACATCACCACAGCAATATATCTTGCAACCATAGCTCGGATTGGGAAAACTAGTGGTCTTAATAGCTTTGGCCTAATGTGGTGCAATGGTGTTGTATGTGGGCCAATTTTGCTCATCTGGACATTCATTCGTGGTGACTTGAAGACAGCAATCAATTTTCCGTATCTCTTCTCACCTGGTTTTATAATTATTCTGCTTTTTTCCTGCATACTGGCATTCTTCTTGAATTACAGTATTTTTCTGAACACAACTCTAAATTCAGCTCTGACACAGACAATTTGTGGTAATCTGAAGGATCTATTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGGCTACCATTTGATATTTGGAATGTAATTGGGCAATTTCTTGGTTTCGCTGGCTCTGGTTTATATGCCTACTATAAGCTCATTGGCAAATAA 1071 0.4174 MSLKPSNSSENPILPMSDPPHNQDDDKLFKGSAMTKRGAFAAISYMSCAGSLSSTSAFFSPILLVMFNKAALSSYNFPSANVITLLQMVCSCCFLYVLRHWRVISFTASESLLMSDNSTKFVSLKTLKHTLPLSGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTPSVIFSVGLIVFGAFVAGARDLSFDAYGYAVVFMANITTAIYLATIARIGKTSGLNSFGLMWCNGVVCGPILLIWTFIRGDLKTAINFPYLFSPGFIIILLFSCILAFFLNYSIFLNTTLNSALTQTICGNLKDLFTIGLGWIIFGGLPFDIWNVIGQFLGFAGSGLYAYYKLIGK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0178 356 MobiDBLite consensus disorder prediction 1 16 - -
Apr9g0178 356 PANTHER BNAA08G30680D PROTEIN 11 356 - -
Apr9g0178 356 MobiDBLite consensus disorder prediction 1 28 - -
Apr9g0178 356 Pfam Triose-phosphate Transporter family 59 348 IPR004853 -
Apr9g0178 356 PANTHER SOLUTE CARRIER FAMILY 35 11 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0178 Apr-Chr9 2308059 2315129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0178 64 293 Organic Solute Cotransporters AT2G13650 24.473 2.91e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0178 K15281 - gmx:100819763 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0178 9 2308059 2315129 Apr9g0178 9 2308059 2315129 ECH
Apr9g0178 9 2308059 2315129 Apr5g1269 5 17025850 17031170 PCT