Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0160 ATGCGACGCAGTCCTCCCACCATCCACTTCCTCGCCGCCACAGCCACCGACGCCGGCACAGGCACCGCCATCACAATGTCTTCAAGCTCTCATCAACGAGGACGCGGAAGAGGATTCTCCGGCCGCTTGTACTCCGGTGGGAGAGGCCAGTTCGTTACCGGCGACGCGCACTTCCAGTCAGTTCGTGACGCCAATTTAGGATTCCGGCGAGGCGAGAGAGGAAGCTTCGCGAACCAAACGCAGCACCATCAGAATCCACCTTATAACCCGAGGGCTCCTTCTCCGCCGCAGCATCACAAACCTCAGTTCCGTCACCCTCCGCCGCAGTTTCGGCCGCCTCCGCCGTCTGATAACCGACAAGCGTTTCGTCCGCCACCCCATATTCGGCCTCGGCCTCCGGATTATCGAGACTGGGAGCTTGCTCTGACGCCGCCGCCTCCCCCTCATTGTGAGAGGTTTAAAGTTCTTTCCTATAATATATTGGCTGACTACCTTGCATTGGACCACCGGAACAAACTTTATTTTCACATACCTCGATACATGTTGGACTGGCAGTGGAGAAAGAGAAACATAATTTTTGAGCTGGGGTTGTGGTCTGCTGATATCATGTGTTTACAGGAGGTTGATAGATTTCATGAGTTGGCAGATGAGTTGAAGCTTAAGGGATACCTTGGCATTTGGAAGATGCGAACAGGGAATCCAGTTGATGGCTGTGCAATCTTTTGGCAAACATCAAGGTTCAATTTGTTGTATGAAGAATTCATTGAGTTTAATAAGCTTGGACTTAGAGATAATGTTGCTCAAATATGTGTACTAGAGTCTATTAATCAAAATGGATCTCTGCCATCCAGCTTGACAGGCTCCAGAAAAGTAGTGGTTTGTAACATTCATGTGCTTTACAATCCTAATAGGGGGGAAATCAAGCTTGGCCAGGTTAGAGTGCTACTTGATAAGGCTAACGCAGTTTCTAAACTCTGGGATGATGCTCCCGTAGTTATCTGTGGGGACTTTAATTGTACCCCTAAGAGTCCATTATACAACTTTATAGCAGAACAGAAGTTAGATCTGTCTGGAATAGCTAGGAATAAGGTATCTGGACAAGCTTCTGCTATAATTTGTCCACCAAAGCTCTGGGGTCCTAATTCTAGTGAAAGATCTGCTAATGGTTTAGTTCAAGCCACATCCACTGATGGTGTCAAGGAAGTTATTGAAAAAAATAATTCTTTGTCGGACATGCAGAATCTGGACACTAAGAGTAATAGTTTGGAGAATCAATGTCAGACTGTTTTGGATATGTCTGTTAAGTCTCTTACAAATGTGGAGAGTGGAAAGGAAAATGGTGTATATGCAGGAAAAGATACTCAGGAAACTGCTGTTGTGCATTCTAATATTTTTCATGAAGTTGATAGAATAAAAGAAGAGCCTAACCCTTCATATAATGAAAGTAGGCGCCATATTGATCATGTAAATGGTGAGATTCAAGACATCACACCTGAGACCGCCTCTGCTTCTGAAGCTGTTCACAGGGATACAACTGGTATGGGCTGCAATGAACATATATCAGATGAAGTCCCAACTTCAAGCAAAGAATTATTAAGCAGAAAATCCAACTTACATGGCCCTGAAGGAGATAAGCATGTGGAGTTTGACTGTTTCCTGACTTCTCTCCTGGAAGACAATCAACCTTCCAGGGTGAAGATTGATCTTGGGTCAACAGATGTTGTCAATGTAGAAATTTCTTCAACTAAACCATCCAGCCAGATTTCAGTTTCCAATGCATTTGAAGCCCCTCAAACAGAGTATGGAGATATCTCATCTTGTGAGGTCACTGATAATGACCAAAATAACAGCTTATCAACCTCATATCTGGCTGACAAATCTCATCAATGGTCCAACATTGACGTTCCACTAGATGAAAAACTAGAGAAATCATTCCTTGATGAGACAGATAAAACCAATATAGGCAGTGAAAATATTTGTGAAGATGATAATGCTTTCATATCTTCATTACATAATTCTGAAGGAATTACTCTTGATCTTGACTCATCTATGAAATCAGATCTTGAAAAGTCATATCAGTTTGAGGAATTAGATTCTGCTTCCAACAACTTGGTGGTGCCTGTAGAAAGCAATCAAGTGGAGGATGACTTGTCTCCAAGTGATACTTTCAAATCTATTGATGCAGAGGAAACTTCTTATTATAATCCATCATTATGGACCCCTATGGAGATAGAAACTGCAACAGGAAATGCAGAGTGCACCTTCTTGGAGCATCCTTTATCACTTAGGAGCACATACACTGAAGCTATGGATTGTTCAGGGACCAGAGACCCACATGGAGAGCCCCTGGTAACCAGTTATAATAGGTGCTTCTCAGGCACCGTAGACTACATATGGCGAACTAAAGGTCTTCAAACAATCAGAGTTCTTGCTCCAATGCCTAAACATGCCATGGAATGGACTCCAGGATTCCCAACAAAGAAATGGGGTAGTGACCATATTGCCTTGGTTTCCGAATTGGCTTTCTTGAAAGATGGTACCGACACTGGCACCTATATTAAATAG 2565 0.4359 MRRSPPTIHFLAATATDAGTGTAITMSSSSHQRGRGRGFSGRLYSGGRGQFVTGDAHFQSVRDANLGFRRGERGSFANQTQHHQNPPYNPRAPSPPQHHKPQFRHPPPQFRPPPPSDNRQAFRPPPHIRPRPPDYRDWELALTPPPPPHCERFKVLSYNILADYLALDHRNKLYFHIPRYMLDWQWRKRNIIFELGLWSADIMCLQEVDRFHELADELKLKGYLGIWKMRTGNPVDGCAIFWQTSRFNLLYEEFIEFNKLGLRDNVAQICVLESINQNGSLPSSLTGSRKVVVCNIHVLYNPNRGEIKLGQVRVLLDKANAVSKLWDDAPVVICGDFNCTPKSPLYNFIAEQKLDLSGIARNKVSGQASAIICPPKLWGPNSSERSANGLVQATSTDGVKEVIEKNNSLSDMQNLDTKSNSLENQCQTVLDMSVKSLTNVESGKENGVYAGKDTQETAVVHSNIFHEVDRIKEEPNPSYNESRRHIDHVNGEIQDITPETASASEAVHRDTTGMGCNEHISDEVPTSSKELLSRKSNLHGPEGDKHVEFDCFLTSLLEDNQPSRVKIDLGSTDVVNVEISSTKPSSQISVSNAFEAPQTEYGDISSCEVTDNDQNNSLSTSYLADKSHQWSNIDVPLDEKLEKSFLDETDKTNIGSENICEDDNAFISSLHNSEGITLDLDSSMKSDLEKSYQFEELDSASNNLVVPVESNQVEDDLSPSDTFKSIDAEETSYYNPSLWTPMEIETATGNAECTFLEHPLSLRSTYTEAMDCSGTRDPHGEPLVTSYNRCFSGTVDYIWRTKGLQTIRVLAPMPKHAMEWTPGFPTKKWGSDHIALVSELAFLKDGTDTGTYIK* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0160 854 MobiDBLite consensus disorder prediction 512 540 - -
Apr9g0160 854 MobiDBLite consensus disorder prediction 21 35 - -
Apr9g0160 854 Gene3D Endonuclease/exonuclease/phosphatase 127 441 IPR036691 -
Apr9g0160 854 Gene3D Endonuclease/exonuclease/phosphatase 680 850 IPR036691 -
Apr9g0160 854 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 40 844 - -
Apr9g0160 854 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 40 844 - -
Apr9g0160 854 Pfam Endonuclease/Exonuclease/phosphatase family 156 357 IPR005135 GO:0003824
Apr9g0160 854 SUPERFAMILY DNase I-like 145 355 IPR036691 -
Apr9g0160 854 MobiDBLite consensus disorder prediction 88 128 - -
Apr9g0160 854 MobiDBLite consensus disorder prediction 523 540 - -
Apr9g0160 854 MobiDBLite consensus disorder prediction 21 42 - -
Apr9g0160 854 MobiDBLite consensus disorder prediction 78 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0160 Apr-Chr9 2105927 2114335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0160 217 352 EF-hand Containing Proteins AT1G02270 25.000 8.17e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0160 - - gmx:100810446 1176.77