Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0135 ATGAAGCCTAAAAGGTGGCTCCCAAGTGTTTTGTTCTTTGTTGTTGCATCAGTAAGCAATGTAGTAGGTGCATTTGTGGGGGTAAACATTGGCACTGATGTTACTGATCTACCATCAGCTTCAAATGTGGTTGCTATTCTAAAAGCACATCAAATTTCACACGTGCGTTTGTATGATGCCAATGAACACATGCTACAAGCACTGTCAAACACTGGCATTGAAGTGATTGTTGGTGTCACAGATGAAGAGATACTAAGTATTGGAGAGTCTGCATCAGTTGCTGCAGCATGGCTTTCTAAGAATGTAGCTGCTTACATGCCATCCACAAACATCACAGCTATATCAGTTGGAAGTGAGGTTCTTACCTCAGTTCCAAAAGTTGCACCTGTTCTTGTTGCTGCCTTGAACAATCTTCACAAGGCCCTTGTTGCTTCAAACCTTAACTTCCGCGTTAAGATTTCAACACCTCAGTCCATGGACATAGTCACAAGGCCTTTTCCTCCTTCTACAGCCACCTTCAACTCTTCATGGAACTCTACAATTTACCAGCTTCTTCAGTTTTTGAAGAACACAAATTCTTCTTACATGTTAAATGCTTACCCTTATTATGGATACACCAAAGGAGATGGCATTTTCCCAATTGAATATGCTCTATTCCAATCCCTTCCTTCAGTGAAGCAAATTGTTGACCCAAACACACTATTCCATTATGACAGCATGTTTGATGCTATGGTAGATGCTACCTATTATGCTATAGAAGCCTTCAATTTCAATAATATACCCATTATTGTCACAGAAACTGGGTGGCCTAGTTTTGGTGGAGCAAATGAACCAGATGCTACTACAAAGAATGCTGAGACATACAATAATAATTTAATTATTAGAGTACTCAATGGTTCAGGTCCTCCTAGTCAACCAAGGATAGCTATTAATACTTACATGTATGAATTATTTAATGAAGACAAGAGGAATGGACCTTTATCAGAAAAGAATTGGGGGATTTTTCATGCTAATGGAAGTAGTGTTTATCCTTTGAGTTTTAGTGCTTCCAACATGAGTGATGGAAATTCTATAGCATCTTTTTGTGTGGCTAAAGATGATGCAGACACTGAAAAACTGGAAGCTGGCTTGAACTGGGCTTGTGGACAAGGCCAAGCAAATTGTGCAGCTATTCAACCAGGGAGACCATGCTATTTACCCAATAATTTGAAAAACCATGCCTCTTATGCTTATAACGATTATTTTCAAAAAATGCATAATGCTGGTGGAACATGTGACTTTGATGGTACAGCTACAACAACTACCCAGGATCCTAGTCATGGATCCTGTATATTTGCGGGAAGTTCCAATTCGAGCATTGGTGGAAGGAGTTCAGCTTCAACAGCATTAGTACCTGTAGGTCCTATTGGAGCAAGTTTGAACATCCAGGTGTCTAGCTTTCAGTATTTGGTATCTTCTATTAGTGTATGTTTTGCTTTGGTGTTGTTATGA 1491 0.395 MKPKRWLPSVLFFVVASVSNVVGAFVGVNIGTDVTDLPSASNVVAILKAHQISHVRLYDANEHMLQALSNTGIEVIVGVTDEEILSIGESASVAAAWLSKNVAAYMPSTNITAISVGSEVLTSVPKVAPVLVAALNNLHKALVASNLNFRVKISTPQSMDIVTRPFPPSTATFNSSWNSTIYQLLQFLKNTNSSYMLNAYPYYGYTKGDGIFPIEYALFQSLPSVKQIVDPNTLFHYDSMFDAMVDATYYAIEAFNFNNIPIIVTETGWPSFGGANEPDATTKNAETYNNNLIIRVLNGSGPPSQPRIAINTYMYELFNEDKRNGPLSEKNWGIFHANGSSVYPLSFSASNMSDGNSIASFCVAKDDADTEKLEAGLNWACGQGQANCAAIQPGRPCYLPNNLKNHASYAYNDYFQKMHNAGGTCDFDGTATTTTQDPSHGSCIFAGSSNSSIGGRSSASTALVPVGPIGASLNIQVSSFQYLVSSISVCFALVLL* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0135 496 Pfam X8 domain 361 432 IPR012946 -
Apr9g0135 496 SUPERFAMILY (Trans)glycosidases 26 346 IPR017853 -
Apr9g0135 496 Gene3D Glycosidases 25 354 - -
Apr9g0135 496 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 2 458 - -
Apr9g0135 496 Gene3D - 356 453 - -
Apr9g0135 496 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 458 IPR044965 GO:0004553|GO:0005975
Apr9g0135 496 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Apr9g0135 496 SMART X8_cls 360 445 IPR012946 -
Apr9g0135 496 Pfam Glycosyl hydrolases family 17 26 347 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0135 Apr-Chr9 1580969 1583898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0135 5 477 Glycoside Hydrolase AT3G13560 64.557 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0135 K19892 - gmx:100786558 851.277