Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0129 ATGGCTCCTCCTCGAGGTCGTGGTGGTGCCGGTGGAGGGTTCAGGGGTAGGGGTGATAGAGGGAGAGGAAGAGGAGGAGACAGAGGTGGCACACCGTTCAAAGCACGTGGTGGTGGCCGAGGAGGAAGTAGAGGTGGTGGCCGTGGAGGAGGAAGAGGTGGTGGCCGTGGCGGCGGCAGGGGTGGGATGAAGGGAGGGAGCAAGGTTGTTGTTGAGCCTCACAGACATGAAGGTATTTTCATTGCTAAGGGTAAAGAAGATGCTCTTGTAACTAAAAATCTTGTCCCTGGTGAGGCTGTTTACAATGAGAAAAGGATCACTGTGCAGAATGAGGATGGTACCAAAGAAGAGTATAGGATTTGGAACCCTTTCCGTTCAAAGTTGGCTGCTGCTATCCTTGGTGGGGTTGACAACATATGGATTAAACCTGGAGCTCGGGTTCTTTACCTAGGAGCTGCTTCTGGAACAACTGTTTCTCATGTGTCGGACGTTGTTGGCCCAACTGGAGTTGTATATGCAGTAGAATTTTCCCATAGAAGTGGACGTGACTTGGTTAATATGGCAAAGAAGCGGACTAATGTCATACCCATTATTGAAGATGCTAGACATCCAGCTAAGTACAGAATGTTGGTTGGCATGGTAGATGTGATATTTTCTGATGTTGCCCAACCCGATCAGGCAAGGATTTTGGGATTGAATGCTTCATATTATCTCAAAGCAGGGGGTCATTTTGTCATTTCAATTAAGGCTAATTGCATTGACTCCACCGTCCCTGCTGAGTCCGTGTTTGCTAGTGAAGTCAACAAGCTGAAGGCAGACCAATTTAAGCCTTCGGAACAAGTCACTCTTGAACCATTTGAGAGGGACCATGCCTGTGTTGTTGGTGGATACAGAATGCCCAAGAAGAAAAAAGATGCCGAGTAG 924 0.4827 MAPPRGRGGAGGGFRGRGDRGRGRGGDRGGTPFKARGGGRGGSRGGGRGGGRGGGRGGGRGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNLVPGEAVYNEKRITVQNEDGTKEEYRIWNPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKAGGHFVISIKANCIDSTVPAESVFASEVNKLKADQFKPSEQVTLEPFERDHACVVGGYRMPKKKKDAE* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0129 307 Gene3D Phosphorylase Kinase; domain 1 66 121 - -
Apr9g0129 307 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 69 295 IPR029063 -
Apr9g0129 307 PIRSF Nop17p 37 301 IPR000692 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 ProSitePatterns Fibrillarin signature. 169 183 IPR020813 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 PANTHER RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN 4 306 - -
Apr9g0129 307 SMART Fibrillarin_2 71 299 IPR000692 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 PRINTS Fibrillarin signature 89 108 IPR000692 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 PRINTS Fibrillarin signature 117 136 IPR000692 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 PRINTS Fibrillarin signature 144 165 IPR000692 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 PRINTS Fibrillarin signature 169 186 IPR000692 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 PRINTS Fibrillarin signature 194 223 IPR000692 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 PRINTS Fibrillarin signature 224 253 IPR000692 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 PRINTS Fibrillarin signature 276 297 IPR000692 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 Pfam Fibrillarin 71 298 IPR000692 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 MobiDBLite consensus disorder prediction 1 68 - -
Apr9g0129 307 Gene3D Vaccinia Virus protein VP39 122 299 IPR029063 -
Apr9g0129 307 Hamap Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase [flpA]. 85 298 IPR000692 GO:0003723|GO:0006364|GO:0008168
Apr9g0129 307 PANTHER FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 4 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0129 Apr-Chr9 1533874 1536202 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0129 K14563 - gmx:100814656 486.493