Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0124 ATGCTTTCGAAGATATCATCATCCCTATTTTCACCCAAACTCAAACTCAAACTCAAACTCAAACCCAAACCCTTTTATTCTTTTATTCTTTCTCGTTCAGCAGCCACTCTCACTGTCAGAAACAGTAAGGAAAAGGCAAAAGCAGCGTTGGCAAAGGAGAAGCGAAGGACTCGTTCGACCAAAGAATTCAACAAAGACGCAATAATTGAACAGTGTTTGATTGGAGAATCACACACTCATCATATTCCCGTGATGCTGGCTGAAGTGTTGGACGTCTTCTCCAACACTCGCTTAACCTCCTTCGTCGATTGCACTCTCGGAGCCGCCGGTCACTCCGCTGCGCTCCTTAGGGCCCATCCCGAGTTGACCCATTTTGTTGGGCTCGACGTGGACCCTCTGGCCCATCACATGGCCCAATCTCGCCTCCATGCCGCTTCCGATAGTTCTGTCAATGTGTTCACTGTGTTAAGGAATTTTAGACACATAAAGGGTGTTCTTAGAGAGACTGGTTCCCAACAACTCTTGGGTGTTGATGGCATCTTGATGGACTTGGGAATGTCCTCTATGCAGGTGGACAATCCCCAGAGAGGATTCAGTGTGCTTGCTGATGGACCCCTTGATATGCGCATGGATCCTCAGGCAAGTCTTAAAGCAGAAGACATATTAAATTCTTGGCCAGATTCTGAAGTGGGCCGTATCCTATGGGAGTATGGAGAAGAAAGTAATTGGCGTACTCTGCAAAAGAAAATTGTCGAAGCCAGATTACGCGGTGGATTGCATTCCACTACTGACTTGCTAGATCTTATTCAGCGTGTGACTCCTGCAATAAAAGGTGGAAGGCAGGGTTGGATAAAGACAGCAACCAGGGTGTTTCAAGCTCTGAGAATCGCTGTTAATGATGAACTGAAGACTCTTGAGGATTCCCTATATTCTTGTTTTGACTGCCTTGCACCTGGGGGTAGGCTTGCTGTCATATCTTTTCATAGTTTAGAGGACAGAATTGTGAAGCAGACATTTCTTGATATAATTAAAGGGAGTGAAGATGTGGAAGAAGGTGAGAGCATCAACCATGACTTGAGAAAGACTATTGAGGAAGTCAAAGCAAAAGAAGCATGGATAAGACAAGTAATATGTGGATCAAATGGAACAATTCTCACAAAAAGACCAATCACGCCATCAGGAGAAGAAGAAAAATTGAACCGCCGAAGTAGAAGTGCAAAGCTCAGGGTTATTCAAAAGCATTGA 1245 0.4482 MLSKISSSLFSPKLKLKLKLKPKPFYSFILSRSAATLTVRNSKEKAKAALAKEKRRTRSTKEFNKDAIIEQCLIGESHTHHIPVMLAEVLDVFSNTRLTSFVDCTLGAAGHSAALLRAHPELTHFVGLDVDPLAHHMAQSRLHAASDSSVNVFTVLRNFRHIKGVLRETGSQQLLGVDGILMDLGMSSMQVDNPQRGFSVLADGPLDMRMDPQASLKAEDILNSWPDSEVGRILWEYGEESNWRTLQKKIVEARLRGGLHSTTDLLDLIQRVTPAIKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLAPGGRLAVISFHSLEDRIVKQTFLDIIKGSEDVEEGESINHDLRKTIEEVKAKEAWIRQVICGSNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQKH* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0124 414 Gene3D Putative methyltransferase TM0872, insert domain 194 301 IPR023397 GO:0008168
Apr9g0124 414 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 81 414 IPR002903 GO:0008168
Apr9g0124 414 SUPERFAMILY Putative methyltransferase TM0872, insert domain 196 299 IPR023397 GO:0008168
Apr9g0124 414 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 80 413 IPR029063 -
Apr9g0124 414 TIGRFAM TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 78 413 IPR002903 GO:0008168
Apr9g0124 414 Pfam MraW methylase family 79 413 IPR002903 GO:0008168
Apr9g0124 414 Gene3D Vaccinia Virus protein VP39 81 411 IPR029063 -
Apr9g0124 414 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 59 413 IPR002903 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0124 K03438 - gmx:100803819 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0124 9 1487121 1489897 Apr9g0124 9 1487121 1489897 ECH