Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0121 ATGCCTCTCGGTAACCTAAGAAAAGGAGATAGCTCCGATTCGAACTTATGTGGTATAGAGGCAGATTTCGACTTTGAAATTTCGTGCGTCGTCGATTACCATGTCAAAATTGGAGAGTTCGATTTCGTTGTTGCTCCTCTGATTGATCCTGAATATCGCCCAAGCTTAAAACAGGCTCCTCAATGCGGGTCATTTGAAGAAGTTGTGCCATTCGTTGAGAAAGACATAAGCATGAGCCCAACCCAGTTCGTTGCTTGTGTAATAGGAAAAATAAGCACGTGGATAGACTTGGATTCAGAAAATGAAAGCCTTAGGACGGATTCTGAAACCGTTCTCAAAAAGGAACTAGATTGGGCCTCTTATCTCTCTTTGCGGGCTTGCCTCCTTCCAGCTCCTAAGGGAACTTTCTGCGCAAATTATGCTAGATGCGTGAACCAAATCATGCATAGCCTACAGAACAGCATGCAGTTGTGGATTCGGATTCCAGTGGGGGAGACAGTTGATGACTCTTTGGTTGATTATTGGAAGACATGGAATTCATTCCGTCTGCTGTGTGAGCATCATAGTCGTTTGTGGGTTGCACTTGATAATTTGGGCGTTCAGCCTTCAGACGACTCAATAGCACGTTGGTATGGAGAGCCTGTTGCTGCCTTTATAATGCGTACAGATTCCTTTTTGTCTAACCAAAGTGATAGCTCTAATAACCTCCCGATGCATCTTCAGAAGTTAATTATTGATTGCTTTAACCGTTCTATACAGTTCGAGACAATAACCCCATTTGTACGATTTTTTGTTTTATTGGTTCGGAATCTTCTGTTTTTGTTCTTACTGAGTGTTTTCTGGACGTCAGATTCAGGAAGATATCCTCTCCAGCCTTATCGGGACCATATTGTATTTCTATACAAACGAATGGATCCTCTTACTGAGCGAGAACGTATCGAGTTTCGTTACAGGGATTTTCCACAGAAACTCTTCCAACCTCTTAAGATAAATCAAAAAGCTCTGACCTATCATGATAATGAGAAAGATGCAACGAAATACAAACTGTACAAAAAAGCAATTTGTCAAGCCTTGCTGGACAGGGTTCCTGATGAAAAAGCATCTGAGATCACCTTGGTATTGGTGGTGGTTGGTGCAGGACGTGGGTGTCTTGTGAAGACCTCAGTACAAGCAGCTAAGGAAACTGGGCGGAAGTTAAAAGTTTATGCTGTGGAAAAGAATCCAAATGCACTTGGTGCACTTAATGGCTTAGTAATGGCTGAGGACATGGAGGATATCGTCACCATAGTCACAAGTGATGTGCGATACTGGAATGCCCCTGAAACGGCTGACATATTGGTTAGTGAAATGCTAGGTACTTTTGGTGACAGTGAGCTGTCTCCTGAATGCCTTGATGGAGCCCAGAGGTTTCTAAAGGAAGATGGAATTTCAATACCCTCTTCGTATACAAGTTTCCTCCATCCAGTGACAGCTTCAAAGTTATATGACAAAATTAAGGCAGAAAAAGATATTTTACGGTTTGAATCTGCTTTTATTGTGAAATTACTCAATGTAACTCAGCTTGCGCCATCTCAACCTGTTTTTACATTCACACATCCAAAACACCACTCTGACAAAGAAAGCAACAGCCGGCATAAAAAATTGCTTTTTTTTATCCCTGACGACAGAGAGTCTGTAATGGTACATGGATTTGCAGGCTACTTTGATGCAACTCTTTACAAGGATGTGCGAATTGGAACTGAACCTTCTACAGCAACACCGAAAGTGTTCACTTGGTATGCAATGTTTTTTCCATTAAGGACACCTACGTGCTTGCATCGTGGTTCTTCCCTCGAAGTACATTTCTGGCGCTGTTGTGATTCTACAAAGGTTTGGTATGAGTGGTGTGTTACATCCCCCACTTTATCTCCAATTCACAACAGTAATGGTGCTTTTGATCTCAACTATGTAAATAATACAGATTTCTTGGGAAGTTTGGCAATTTCTCGGGCAAAGTTCTGA 2001 0.4193 MPLGNLRKGDSSDSNLCGIEADFDFEISCVVDYHVKIGEFDFVVAPLIDPEYRPSLKQAPQCGSFEEVVPFVEKDISMSPTQFVACVIGKISTWIDLDSENESLRTDSETVLKKELDWASYLSLRACLLPAPKGTFCANYARCVNQIMHSLQNSMQLWIRIPVGETVDDSLVDYWKTWNSFRLLCEHHSRLWVALDNLGVQPSDDSIARWYGEPVAAFIMRTDSFLSNQSDSSNNLPMHLQKLIIDCFNRSIQFETITPFVRFFVLLVRNLLFLFLLSVFWTSDSGRYPLQPYRDHIVFLYKRMDPLTERERIEFRYRDFPQKLFQPLKINQKALTYHDNEKDATKYKLYKKAICQALLDRVPDEKASEITLVLVVVGAGRGCLVKTSVQAAKETGRKLKVYAVEKNPNALGALNGLVMAEDMEDIVTIVTSDVRYWNAPETADILVSEMLGTFGDSELSPECLDGAQRFLKEDGISIPSSYTSFLHPVTASKLYDKIKAEKDILRFESAFIVKLLNVTQLAPSQPVFTFTHPKHHSDKESNSRHKKLLFFIPDDRESVMVHGFAGYFDATLYKDVRIGTEPSTATPKVFTWYAMFFPLRTPTCLHRGSSLEVHFWRCCDSTKVWYEWCVTSPTLSPIHNSNGAFDLNYVNNTDFLGSLAISRAKF* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0121 666 Pfam PRMT5 arginine-N-methyltransferase 310 478 IPR035075 -
Apr9g0121 666 Gene3D - 16 311 - -
Apr9g0121 666 Pfam PRMT5 TIM barrel domain 40 253 IPR035247 -
Apr9g0121 666 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 321 628 IPR025799 GO:0016274|GO:0018216
Apr9g0121 666 Gene3D - 481 653 - -
Apr9g0121 666 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 1 644 IPR025799 GO:0016274|GO:0018216
Apr9g0121 666 Pfam PRMT5 oligomerisation domain 481 638 IPR035248 -
Apr9g0121 666 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 644 - -
Apr9g0121 666 PIRSF PRMT5 5 648 IPR007857 GO:0006479|GO:0008168|GO:0035246
Apr9g0121 666 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 339 643 IPR029063 -
Apr9g0121 666 Gene3D Vaccinia Virus protein VP39 314 480 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0121 Apr-Chr9 1460158 1475275 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0121 K02516 - gmx:100815240 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0121 9 1460158 1475275 Apr9g0121 9 1460158 1475275 ECH