Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0080 ATGAGGATCGAGCAAGAGAGTGACGGAGTCTCCGCTTCCACAAAGCACCTCGTCTTTGCCTATTACGTCACTGGTCATGGTTTTGGCCATGCCACTCGAGTCACCGAGGTGGTGAGACATTTGATTCATGCGGGGCATGATGTGCATGTGGTCACTGGTGCTCCTGATTTCGTTTTCACCTCTGAAGTACAGTCTCCTCGCCTATTTATTCGCAAGGTTCTTTTGGACTGTGGAGCTGTTCAGTCAGATGCTTTGACCGTGGATCGCCTTGCTTCGTTGCAGAAGTATTCTGAAACAGCAGTGAAGCCTCGTGCTGGTATCTTGGCTCAAGAAACAGAATGGCTGAACTCAATCAAAGCTGACTTAGTGGTCTCTGATGTTGTCCCAGTTGCATGTCGAGCAGCAGCAGATGCTGGCATTCGCTCTGTTTGTGTAACCAATTTCAGTTGGGACTTCATCTATGCAGAGTATGTCATGGCTGCTGGACTGCATCACCGTTCAATAGTTTGGCAGATAGCTGAGGACTATTCCCATTGTGAATTCCTTATCCGCCTCCCGGGATATTGCCCAATGCCTGCTTTTCGTGATATTATTGATGTCCCTCTGGTAGTGAGGAGGTTGCACAAATCTGCAAAAGAGGCAAGGAAAGAACTTGGAGTAGCTGATGATGTGAAGCTAGTTATTCTCAACTTTGGTGGGCAGGAGCCTTTGGACTTAAAGAGAGGACAAAGCTCAAGCGCCCATTTTACTCCATCAGGGTTGAAGCTAAAGGAGGAATTCTTACCACCTGGTTGGTTGTGCTTGGTTTGTGGTGCTCCAGACAATGAAGGCCTTCCACCTAACTTTATGAAACTTGCTAAAGATGCATATACGCCTGACTTGATTGCAGCATCTGACTGTATGCTTGGAAAAATTGGATATGGCACCGTTAGTGAGGCCCTGGCATACAAGTGTCCATTTGTCTTTGTGCGTAGAGATTATTTCAATGAAGAACCCTTTTTAAGAAATATGCTTGAGTATTATCAATGTGGTGTGGAAATGATTAGGAGGGATTTACTCACTGGTCACTGGAGACCTTATCTTGAACGTGCAATAAGTTTGAAACCCTGCTATGAAGCAGGCATTAATGGTGGTGAGGTGGCAGCACACATCCTGCAGGAGACGGCTTTTGGAAAAAATTATGCATCGGATAAGCTTAGTGGGGCAAGAAGATTGCGTGATGCCATAGTTCTTGGGTATCAACTCCAAAGGGCGCCTGGCCGAGATATTGCAATTCCAGAATGGTATGCAACTGCTGAAAACCAACTTGGCCACACAACACCTGTTTCCCCAGAGGATGATGGAAGCTCTCCATTCGACTCGGGCATCGAAGATTTTGACATTCTTCATGGAGATGTTCAATGTCTTCAAGATACTGTAGCATTCTTAAAGAACCTTTCTGAATTACAGGAGAAACACACAAGGAGGGAGCGCAAGGCTGCAGCTAATCTCTTCCACTGGGAGGAAGAAATTTTTGTGACGAGAGCTCCTGGAAGGTTGGATGTAATGGGCGGTATTGCTGACTATTCTGGAAGCCTTGTCCTTCAGATGCCAATTAAAGAAGCCTGCCATGTTGCTTGCCAAAGAGTCCATCCAAGTAAACATAGGCTGTGGAAACATGCTGAGGCTCGACAAAATGACAAGGGAGGAAATCCAACTGCTGTCTTGCAAATAGTATCATATGGCTCAGAATTGAGCAATCGTGGTCCAACATTTGACATGGATTTGTCTGATTTTATGGAGGAAGACAAGCCAATCTCATATGAGAAAGCAAAGAAATACTTTGCCCAAGATCCTTCCCAAAAGTGGGCAGCATATGTTGCAGGGGCAATTTTGGTCTTAATGACTGAACTGGGTGTGCGATTTGAAGACAGTATTAGCATGCTGGTTTCGTCTGCAGTTCCAGAAGGGAAAGGCGTATCATCTTCTGCATCTGTGGAGGTTGCTAGTATGTCTGCTATTGCAGCTGCTCATGGATTAAATATCAGCCCAAGGGATTTGGCCATTCTCTGCCAGAAGGTGGAAAATCACATTGTAGGAGCTCCATGTGGTGTCATGGACCAGATGGCTTCAGCATGTGGGGAAGCCAACAAACTTCTTGCTATGATTTGCCAGCCTGCAGAGATTGTTGGCCTTGTTGAAATTCCCAGCCATATCAGGGTCTGGGGAATTGATTCTGGAATAAGACACAGTGTTGGAGGTGCAGACTATGGTTCTGTCCGAATTGGCACCTTTATGGGTATGAAGATGATAAAGGCCAGGGCTTCTGAGGTATTGTCTGAGATGTGTGCTGCTAATGGGTTGAACTACGAAGAAGTGGAACAAGATGATCTAGAACTACTTAAACAAGAAGCCTCCTTAGACTACTTATGTAATTTGTCACCTCACAGATTTGAGGCTCTTTATACAAAGAAAATTCCAGAGTCCATTGGTGGGGAGACATTTTTGGAGGAATATAAAAATCATAATGATCCTGTCACTATTATTGATCAGAAGCGTACTTATGGAGTCAAAGCTCCCACGATGCATCCTATCTATGAAAATTTCCGAGTCAAGACCTTCAAGGCACTTCTCACGTCGGCAACTTCAATCGAGCAACTTACAGCCTTAGGAGAATTATTATATCAGTGTCACTATAGCTACAGTGCTTGTGGACTTGGCTCTGATGGAACAGACAGGCTTGTACACTTGGTACAAGAGTTGCAGCATAGTCAAGCATCTAAATCTGAAGGTGGGACATTATGTGGAGCCAAAATAACTGGTGGTGGTTCAGGTGGAACAGTTTGTGTAATTGGTAGAAATTCTCTCAAGGCCAGTGAACATATTTTTGAGGTTCAACAGAGGTATAAGAAAGCTACTGGCTACTTGCCCTTCATTTTTGAGGGCTCATCACCAGGTGCTGGAAAGTTTGGATACCTGAAAATACGCCGTCGAGCTACCCCTAAAAAGGCTAACGCCGGCGGTGATGATGGTGCAGTCACGGTGGAGAATAACACCTGA 3039 0.4521 MRIEQESDGVSASTKHLVFAYYVTGHGFGHATRVTEVVRHLIHAGHDVHVVTGAPDFVFTSEVQSPRLFIRKVLLDCGAVQSDALTVDRLASLQKYSETAVKPRAGILAQETEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGLHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDIIDVPLVVRRLHKSAKEARKELGVADDVKLVILNFGGQEPLDLKRGQSSSAHFTPSGLKLKEEFLPPGWLCLVCGAPDNEGLPPNFMKLAKDAYTPDLIAASDCMLGKIGYGTVSEALAYKCPFVFVRRDYFNEEPFLRNMLEYYQCGVEMIRRDLLTGHWRPYLERAISLKPCYEAGINGGEVAAHILQETAFGKNYASDKLSGARRLRDAIVLGYQLQRAPGRDIAIPEWYATAENQLGHTTPVSPEDDGSSPFDSGIEDFDILHGDVQCLQDTVAFLKNLSELQEKHTRRERKAAANLFHWEEEIFVTRAPGRLDVMGGIADYSGSLVLQMPIKEACHVACQRVHPSKHRLWKHAEARQNDKGGNPTAVLQIVSYGSELSNRGPTFDMDLSDFMEEDKPISYEKAKKYFAQDPSQKWAAYVAGAILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNISPRDLAILCQKVENHIVGAPCGVMDQMASACGEANKLLAMICQPAEIVGLVEIPSHIRVWGIDSGIRHSVGGADYGSVRIGTFMGMKMIKARASEVLSEMCAANGLNYEEVEQDDLELLKQEASLDYLCNLSPHRFEALYTKKIPESIGGETFLEEYKNHNDPVTIIDQKRTYGVKAPTMHPIYENFRVKTFKALLTSATSIEQLTALGELLYQCHYSYSACGLGSDGTDRLVHLVQELQHSQASKSEGGTLCGAKITGGGSGGTVCVIGRNSLKASEHIFEVQQRYKKATGYLPFIFEGSSPGAGKFGYLKIRRRATPKKANAGGDDGAVTVENNT* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0080 1012 SUPERFAMILY Ribosomal protein S5 domain 2-like 501 721 IPR020568 -
Apr9g0080 1012 Pfam GHMP kinases C terminal 878 963 IPR013750 -
Apr9g0080 1012 Gene3D Glycogen Phosphorylase B; 208 366 - -
Apr9g0080 1012 Gene3D Glycogen Phosphorylase B; 13 168 - -
Apr9g0080 1012 PIRSF Gal_kin_glcsltr 1 994 IPR012369 -
Apr9g0080 1012 PANTHER MEVALONATE KINASE/GALACTOKINASE 17 989 - -
Apr9g0080 1012 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 349 - -
Apr9g0080 1012 Pfam GHMP kinases N terminal domain 642 707 IPR006204 GO:0005524
Apr9g0080 1012 Gene3D - 835 967 IPR036554 -
Apr9g0080 1012 Pfam Galactokinase galactose-binding signature 498 542 IPR019539 -
Apr9g0080 1012 PRINTS Mevalonate kinase family signature 509 533 - -
Apr9g0080 1012 PRINTS Mevalonate kinase family signature 645 667 - -
Apr9g0080 1012 PRINTS Mevalonate kinase family signature 688 707 - -
Apr9g0080 1012 PRINTS Mevalonate kinase family signature 929 946 - -
Apr9g0080 1012 SUPERFAMILY GHMP Kinase, C-terminal domain 733 982 IPR036554 -
Apr9g0080 1012 Gene3D - 479 734 IPR014721 -
Apr9g0080 1012 PANTHER L-ARABINOKINASE 17 989 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0080 K12446 - gmx:100787860 1791.16