Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0079 ATGCTGGCCAATGGCCTCTGTAAAGCAGGGAAACAAGAGCTGCTACTGGTTGAAGGACGTTTCATACAGCCTGATGTCTACAATGTAATTATGAACAGCCTATGCAAGGAATCACGTGTGACAGAGGCATTGGATCTTTTGAAGGAAGCAGTTGCTTTGTTCAACGAAATGGTATCAAAAAGCATCAAACCAGGTATTCGGACGGATTGTTCCAGATATACAGACTTACAATTGCCTGATGAAAGGGTTTTGGTAAACGAGGAAAAATTTGTTATATTTGGAAGCTCTTCTGGTAGAATGCTGATAGGGCTGATGTCAAACAAGACGGATAGAAGAGTTTGGGTTACTGTGAATGCTAGTGATAATAATAAGAAAGTGAAGAGTGTTAACTTCAATGGTGTGCCTACTAAGGTTTTGTTGCTTAGGAACATGTGTCAAATTCAGGACATGAAAACAGGAATGAGGAACAAACTGGTTCGGCGGATAAAAAAGTTGCTTTCTTGTTCTGAGTGTAGAACGAGTTCTCCAAATGATGAAACAAGTGTGGATGTGCGTGAGGAATATGCCAATGCATTTCGAACAGAGTCATACACTGAGTTTTGGACACGTGTCATTGCATATTCCAATGGTGAATCCTCATCATGTTTGTCAAGAGAGTCGACTACATCGGCTCGGCTTCCTTCTTACCGTTTGTTTGCGGAGCATCTCTTGGATCCAAATCAACCCACGGTTTCTGAAGTCTTATCCAAAATCCAAAACCAACCCATTATCCATTCTCTCTTATTAGACTATTTTCTCCACACTTCCAATGCTTTTCTTCTTTGTAGTCATCTGTTAAAGGACATTGATCGTGTTCGTGCAAAATACACATCACTTAAGACTGTTCTTCAATGTGTTCCAAATAATCAAGTTCCTTCCTCAATGCTAATCTCCCATTTGGCTCAATTTTCTAACTCCTTAAACCCATTTGCCACATCTAGCCCCTCACCATGTCGGGTTCGGGTCACCCAATGCCATTGCTCCGACTTGCAAAAGCGGCTTGAGCTAAGCCGTGACAAGGTGCAAGCCAAGCTTCAGTTGATTGTCAGGCTAAAATATGGCTCGGCTTGCCTTCTTGTGATAGTAACAACTTCACTTATGGTGGTTGTTGCTACTCATGGCTTTGCTTTGCTTGTGGCTGTCCCGGGATTGGCTTCCTTGAATTTGGCTTCAAAATGGAGGTTGGTTAAGGTCGCGGCTCAACTTGATGCAGCCGCGAAAGGAACTTATATATTGAATAAGGACTTGGAGACAATAAGTCGGCTTGTGGCTCGGCTTAATGATGAGTTGGAGCACATGAGGGCAACAGTGAGGTTTTGGCTTGAGAGGAAAGAGGATAAAATTCAAGCCGACGGTGAAGTGGCGCGCCTATTGAAGAAGAACCAATGTACCTTTAGTGATCAATTGGATGAATTGGAAGAGCATTTGTATTTGTGTTTGATGACTATTAATAGGGCAAGAGATCTTGTGTTGAATCAAATCACTCACTAA 1530 0.4229 MLANGLCKAGKQELLLVEGRFIQPDVYNVIMNSLCKESRVTEALDLLKEAVALFNEMVSKSIKPGIRTDCSRYTDLQLPDERVLVNEEKFVIFGSSSGRMLIGLMSNKTDRRVWVTVNASDNNKKVKSVNFNGVPTKVLLLRNMCQIQDMKTGMRNKLVRRIKKLLSCSECRTSSPNDETSVDVREEYANAFRTESYTEFWTRVIAYSNGESSSCLSRESTTSARLPSYRLFAEHLLDPNQPTVSEVLSKIQNQPIIHSLLLDYFLHTSNAFLLCSHLLKDIDRVRAKYTSLKTVLQCVPNNQVPSSMLISHLAQFSNSLNPFATSSPSPCRVRVTQCHCSDLQKRLELSRDKVQAKLQLIVRLKYGSACLLVIVTTSLMVVVATHGFALLVAVPGLASLNLASKWRLVKVAAQLDAAAKGTYILNKDLETISRLVARLNDELEHMRATVRFWLERKEDKIQADGEVARLLKKNQCTFSDQLDELEEHLYLCLMTINRARDLVLNQITH* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0079 509 TIGRFAM PPR: pentatricopeptide repeat domain 26 49 IPR002885 -
Apr9g0079 509 PANTHER UPF0496 PROTEIN 3 154 508 - -
Apr9g0079 509 PANTHER UPF0496 PROTEIN 3-RELATED 154 508 IPR007749 -
Apr9g0079 509 Coils Coil 429 456 - -
Apr9g0079 509 Pfam Protein of unknown function (DUF677) 356 507 IPR007749 -
Apr9g0079 509 Pfam PPR repeat 26 49 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0079 Apr-Chr9 1015218 1022311 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0079 - - aprc:113847676 986.097