Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0072 ATGTCTATGGATCCAAAGAAATCTAACAAGATCAGAGAAATTGTTAGGCTTCAACAGATCCTCAAGAAATGGAGAAGGTTAGCAAACTCTTCGAAGACCACCACCGCATCAACCACAACAACTACCTCTAGCAAGAGCATGAAGTTTCTGAAAAGAACACTTTCTTTATCCGAACGTGAGGGAGGATCAAGCAATGTTGTTCCAAAAGGGTACCTAGCTGTTTGTGTTGGTGAAGAGCTTAAGAGGTTCATTATACCAACTGAATATTTGGGTTATCAAGCCTTTCAGATACTCTTGAGAGAAGCAGAAGAAGAGTTTGGATTTCAACAAACGGGTGTTTTGAGGATTCCTTGTGAAGTATCCATTTTTGAAAGTGTCTTGAAGATGGTTGAAGGAAAGAAGGACAAGTTTTCCTCTCAAGAATGTAGACTTAGCATTGAAGAGATGATAGGGTACTCCTCGGAAAGCCAACTTCCTTATTCTCACCATCCTCAAAGTCCATTGTGCAGATGA 513 0.4035 MSMDPKKSNKIREIVRLQQILKKWRRLANSSKTTTASTTTTTSSKSMKFLKRTLSLSEREGGSSNVVPKGYLAVCVGEELKRFIIPTEYLGYQAFQILLREAEEEFGFQQTGVLRIPCEVSIFESVLKMVEGKKDKFSSQECRLSIEEMIGYSSESQLPYSHHPQSPLCR* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0072 170 Pfam Auxin responsive protein 23 130 IPR003676 GO:0009733
Apr9g0072 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 170 IPR003676 GO:0009733
Apr9g0072 170 PANTHER SAUR FAMILY PROTEIN 7 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0072 Apr-Chr9 956536 957048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0072 3 170 Calmodulin-binding Proteins AT4G31320 48.454 1.81e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0072 K14488 - gmx:100799598 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1157 5 16111465 16111959 Apr9g0072 9 956536 957048 PCT