Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1157 ATGGATCCACCGAAGAAAACTAACAAGATCAGAGAAATTGTTAGGCTTCAACAGATCCTTAAGAAATGGAGAAGGGTAGCCAGTTCTTCAAAAGCAAGTAGAAATAACAACAGCAACAAAAGCATCAACTTTCTGAAAAGAACACTTTCTATATCCGAACGTGAGGGAGGTTCCAACAACGTGGTTCCCAAAGGGTATGTTGCTGTTTGTGTTGGCGTGGACCTTAGCAGGTTCGTTATACCAACTGAGTATTTGGGTCATGGTGCCTTTCACATGTTACTAAGAGAAGCTGAGGAAGAATTTGGGTTTGAACAGACTGGTGTTCTGAGGATTCCTTGTGAAGTGCCTGTGTTTGAGAGTATCTTGAAGATAGTGGAGGGTAAGGACAAGTTTTCTACTCAGAAATGTAGATTTAGCTTTGAAAAGATGATGGGCTATTGTTCCTCAAACCAACTTGCTTATTCTCATCAACCTCAAAGTCCAATGTGCAGATAG 495 0.4101 MDPPKKTNKIREIVRLQQILKKWRRVASSSKASRNNNSNKSINFLKRTLSISEREGGSNNVVPKGYVAVCVGVDLSRFVIPTEYLGHGAFHMLLREAEEEFGFEQTGVLRIPCEVPVFESILKIVEGKDKFSTQKCRFSFEKMMGYCSSNQLAYSHQPQSPMCR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1157 164 Pfam Auxin responsive protein 21 124 IPR003676 GO:0009733
Apr5g1157 164 PANTHER OSJNBA0060N03.10 PROTEIN 6 164 - -
Apr5g1157 164 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 164 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1157 Apr-Chr5 16111465 16111959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1157 5 164 Calmodulin-binding Proteins AT4G31320 51.309 2.42e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1157 K14488 - aprc:113865930 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1157 5 16111465 16111959 Apr5g1157 5 16111465 16111959 ECH
Apr5g1157 5 16111465 16111959 Apr9g0072 9 956536 957048 PCT