Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0053 ATGCTCAAGTTGTGGAAATGGTACCAAAATTGCTTGGCCCTTCACCCTGTTAAGACTCAGGTCATTAGCTCTGGCTTGATTTGGGGTGCTGGTGACATTGCTGCTCAGGCAGTTACCCACTACACTGCCAAGACCCGTGTCACAGTGGAGGAGGTATTCTTCCAAATACCCAAATTTCCCTTCAATGATTTGGCTTTTTGGAAAATGGATAAACAATTCAAGATCAACTGGAAACGGGTGTCTACAACCAGCTTGTTTGGGTTAGGATTTGTTGGCCCTGTTGGCCACTACTGGTATGAAGGTTTGGATCGGGTTATAAGACTGAGACTTATGCTTAAACCAAATTCCTTCCGCTTTGTTGCCACCAAAGTTGCCGTTGATGGGTTTATCTTTGGACCGCTGGATTTACTCGTGTTTTTCACTTATATGGGTTTTTCTACTGGAAAGAGTGTTCCTCAAATAAAAGAAGACGTGAAGAGAGATTTCCTGCCGGCGTTTGTTGTAGAAGGGGGCATATGGCCAATGGTTCAGGTTGCGAATTTTCGGTTTATACCTGTAAGGTACCAGCTCCTTTATGTCAATTTCTTCTGCTTGTTGGATAGCTGTTTCTTGTCTTGGGTTGAGCAACAACAAGATGCTTCATGGAAACAATGGTTGAAATCGTTTCTACCTTTGAAGTAA 681 0.4332 MLKLWKWYQNCLALHPVKTQVISSGLIWGAGDIAAQAVTHYTAKTRVTVEEVFFQIPKFPFNDLAFWKMDKQFKINWKRVSTTSLFGLGFVGPVGHYWYEGLDRVIRLRLMLKPNSFRFVATKVAVDGFIFGPLDLLVFFTYMGFSTGKSVPQIKEDVKRDFLPAFVVEGGIWPMVQVANFRFIPVRYQLLYVNFFCLLDSCFLSWVEQQQDASWKQWLKSFLPLK* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0053 226 Pfam Mpv17 / PMP22 family 145 205 IPR007248 GO:0016021
Apr9g0053 226 PANTHER PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN 1 225 - -
Apr9g0053 226 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 1 225 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0053 Apr-Chr9 681474 684916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0053 7 211 Miscellaneous Gene Families AT2G14860 24.390 3.20e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0053 K13348 - gmx:100805283 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0053 9 681474 684916 Apr9g0053 9 681474 684916 ECH