Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0051 ATGGCGCAACTTGGAGTCCCATTGAAGTTACAGTCACACAAACTCTCTCACGCTCACACTCACATCCCTTTCTTCTCCTCTAACTCTCTTTCGCACCTTCCCCTTCGCACCTTCACTCCCTCTCGTTTTCACCCCTTGATCTTATCAACGCTTCGTTTCCGCACTTTCACACCATGCAACACCAACAAATCAGATATTATGTCGCAGCTGGAACTCGGGAAACCCGAACACCAAATGGGGAAACCCGAGAAACGAGTCAACGGCATATTCTGGCTCATTCTCCTCAACATTGCCATATTCGTCGCTGACCATTTTTTTCAGGTTAACAGCATCAAGGCTTTGTACTTGTACCACAATTGGCCTGCTTGGTACCAGTTTGTCACAGCAACATTTTGTCACGCTAATTGGAAGCATCTTTCTAGCAACCTTTTCTTCTTGTACATTTTTGGAAAGCTTGTTGAAGAAGAGGAAGGGAACTTTGCTTTGTGGCTTTCTTACATTCTTACAGGTGTTGGAGCAAACCTTGTTTCATGGTTGGTTTTACCAAGAAATGCAGTTTCTGTTGGAGCTTCCGGTGCTGTTTTTGGGTTGTTTACTATCAGTGTTTTTGTAAAGATGTCCTGGGATTGGAGGAAGATTCTTGAAGTGCTTATATTGGGTCAGTTTGTCATAGAGAAGGTCATGGAAGCAGCCCAAGCTTCAACATCGTTATCAGGAACCTTTCATGGAGGCTACTCATTGCAAAGTGTCAATCATATTGCACATCTATCTGGTGCTCTTGTTGGTGTGCTTTTGGTTTGGCTCCTTAGCAAAGTTCCTTCTGATCCTTCAGTTTGA 837 0.4397 MAQLGVPLKLQSHKLSHAHTHIPFFSSNSLSHLPLRTFTPSRFHPLILSTLRFRTFTPCNTNKSDIMSQLELGKPEHQMGKPEKRVNGIFWLILLNIAIFVADHFFQVNSIKALYLYHNWPAWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLVSWLVLPRNAVSVGASGAVFGLFTISVFVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSGTFHGGYSLQSVNHIAHLSGALVGVLLVWLLSKVPSDPSV* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0051 278 Pfam Rhomboid family 123 271 IPR022764 GO:0004252|GO:0016021
Apr9g0051 278 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 41 275 - -
Apr9g0051 278 PANTHER RHOMBOID-RELATED PROTEIN 41 275 - -
Apr9g0051 278 SUPERFAMILY Rhomboid-like 87 273 IPR035952 -
Apr9g0051 278 Gene3D - 83 274 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0051 Apr-Chr9 671467 674784 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0051 - - gmx:100781449 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0051 9 671467 674784 Apr9g0051 9 671467 674784 ECH