Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0043 ATGGTGAATTCTATGGTTGAACGCGCCACGAGCGACATGCTCATAGGACCAGATTGGGCCATGAACATCGAGATCTGCGATATGCTGAATCATGACCCTGGGCAAGCAAAGGATGTTGTTAAAGGCATAAAGAAGCGGATTGGAAGTAAAAATTCAAAAGTTCAACTTCTTGCACTAACTTTGCTGGAGACAATCATAAAGAACTGTGGAGATATTGTTCACATGCATGTTGCTGAGAGAGATGTGCTTCATGAGATGGTGAAAATAGTAAAGAAGAAGCCTGATTTTCATGTCAGAGAGAAGATACTGATTCTTATAGACACTTGGCAAGAAGCATTTGGAGGGCCGAGGGCAAGATACCCACAATACTATGCTGCATACCAGGAGTTGTTGCGTGCTGGGGCAGTATTCCCTCAAAGGTCTGAACAATCTGCACCTGTATTCACACCTCCACAAACACAGCCATTGGCATCATACCCTCAAAATATACGTGACTTGGATGCTGGGCAGGACACAGCTGAGGCCTCTGCAGAGTCTGAGTTCCCAACACTAAGTTTGACTGAAATTCAGAATGCACGTGGTATCATGGATGTTCTTGCAGAGATGCTCAATGCATTAGACCCTAGTAACAAAGAAGGCCTTAGACAGGAGGTTATTATTGATTTGGTGGAGCAGTGTCGAACATACAAGCAGAGAGTTGTACACCTAGTTAACTCAACTTCGGATGAATCTCTGCTATGCCAGGGACTAGCTTTGAATGATGATCTTCAGCGTGTACTGGCCAAGCATGAATCTATTTCTTCTGGAACTTCTACTCTAAATCAAAATCAAACAGAGAATTTAAAACCTGCCCCTGCTGGAACACTTGTAGATATTGATGCTCCTTTGGTTGATACTGGAGATACTAGTAAACAAACTGATGGGCGATCCTCTTCTGGTGTTGAAGCAGGGTCCCAAACATTGAATCAGTTATTACTTCCTGCGCCCCCGACTGCTAATGGTTCAGCGCTCCCTGCAAAGGTTGATCCCAAATTGGACCTGCTCAGTGGCGATGACTATAACTCACCGAAAGCAGATACTTCACTTGCTCTTGTTCCTTTAGGAGAACAACAGCCTGTCAGTCCTCTGTCTCAGCAGAATGCCCTTGTTCTTTTTGATATGTTTTCTAATGGAAATAATGCACCTACATCTGTCAATACCCAGCCAACCAATGTTGCTGGCCAAAACAGTCCATTTGCTCCCCAATTTCAACAGCAAACAGTCATGTCTCAAGGTGGATTTTACCCCAATGGAAATGTCCCAAATGCGGGTTCACCTCAGTATGAACAATCACTTTATACACAAAGTACGGGTCCTGCCTGGAATGGTCAGGTTGCACAACAGCAACAGCCACCTTCGCCTGTTTATGGTACACAAAACAGTGGATCGTTGCCACCACCTCCCTGGGAAGCTCAACCAGCAGATAATGGCAGTCCAGTGGCCGGCACCCAGTATCCACAGCCACAGCAAGTCACGCAAGTGGGTATGCCAAATGTGCAGACTGCTACACACCGTCAGGGGGCTCAAGCGATGGGCAATGATCAGGCTGTTGGTATGTATATGCAACCAAATGCAAACAGCCAAATGTCAGCAATCAATAACCATGTTGGAAGCAATCAAATGGGCTTGCAACCTCAGCATATTCAAGGTGTTGCAGGGCCCTACATGGGTATGTTTTCACATCAAATGCAGGCTGGTCCTGGGGTTTCCATGTATCCTCAGCAAATGTTTGGAAACCAATTTATGGGATACGGCTATGGTCAGCAACAAGGAGTTCCATATATTGAGCAGCAAATGTATGGTATGTCTATTAGAGATGATAGTGGTTTGAGAAACTCCTACCAGGTTTCTTCATCTTATGCTCCATCCGGGAAGCCTTCCAAGCCAGAGGATAAGCTATTCGGTGACCTTGTTGACATGGCTAAATTGAAGCCCAAGCCCACTCCAGGCCGGGCTGGCAGCATGTAA 2007 0.4569 MVNSMVERATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDFHVREKILILIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSEQSAPVFTPPQTQPLASYPQNIRDLDAGQDTAEASAESEFPTLSLTEIQNARGIMDVLAEMLNALDPSNKEGLRQEVIIDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESISSGTSTLNQNQTENLKPAPAGTLVDIDAPLVDTGDTSKQTDGRSSSGVEAGSQTLNQLLLPAPPTANGSALPAKVDPKLDLLSGDDYNSPKADTSLALVPLGEQQPVSPLSQQNALVLFDMFSNGNNAPTSVNTQPTNVAGQNSPFAPQFQQQTVMSQGGFYPNGNVPNAGSPQYEQSLYTQSTGPAWNGQVAQQQQPPSPVYGTQNSGSLPPPPWEAQPADNGSPVAGTQYPQPQQVTQVGMPNVQTATHRQGAQAMGNDQAVGMYMQPNANSQMSAINNHVGSNQMGLQPQHIQGVAGPYMGMFSHQMQAGPGVSMYPQQMFGNQFMGYGYGQQQGVPYIEQQMYGMSIRDDSGLRNSYQVSSSYAPSGKPSKPEDKLFGDLVDMAKLKPKPTPGRAGSM* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0043 668 PANTHER TARGET OF MYB PROTEIN 1 1 662 - -
Apr9g0043 668 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
Apr9g0043 668 MobiDBLite consensus disorder prediction 299 316 - -
Apr9g0043 668 MobiDBLite consensus disorder prediction 450 478 - -
Apr9g0043 668 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Apr9g0043 668 MobiDBLite consensus disorder prediction 626 668 - -
Apr9g0043 668 MobiDBLite consensus disorder prediction 268 283 - -
Apr9g0043 668 CDD VHS 2 132 - -
Apr9g0043 668 CDD GAT_GGA_like_plant 188 266 - -
Apr9g0043 668 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Apr9g0043 668 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Apr9g0043 668 MobiDBLite consensus disorder prediction 450 499 - -
Apr9g0043 668 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Apr9g0043 668 MobiDBLite consensus disorder prediction 268 316 - -
Apr9g0043 668 SUPERFAMILY GAT-like domain 141 269 - -
Apr9g0043 668 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Apr9g0043 668 Gene3D - 1 135 IPR008942 -
Apr9g0043 668 Gene3D - 183 274 IPR038425 -
Apr9g0043 668 PANTHER TOM1-LIKE PROTEIN 1 662 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0043 Apr-Chr9 586026 596599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0043 - - gmx:100809022 1101.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0043 9 586026 596599 Apr9g0043 9 586026 596599 ECH