Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0012 ATGTTCACATCCTCCCACTTTAACATCAACACCAACACCAACACCAACACCAACAGCGACACCACCATTCTCTCCGCCGGTGGCGCTGCCAGGTGCACGTTCTCGTTAATGGCCGCCGCGGCGTCGCCCTCCACTCCGGTGGTTCTGTTCACCGCCCTCGCCGGCGTGGCCCTTGTGGCTGTGATTTTCTACGGTGCCAGTAGGGGTCGGCTTAAATCGCCATGGTCACATAGGAAGCGAAAAAATGCCCTTTCTCCTCATCAATGGAAAAGCTTCTTTACAGAAGATGGTAGACTCTGTGATGGTGGAATTAAGCTCCTTAAAAGAGTGCGCAGTGGAGGTGTTGATCCTAGTATTAGGGCTGAGGTTTGGCCATTCCTGCTTGGAGCATATGACTTGGACAGCACCAGAGACGAAAGAGATGTTAAAAGAATCCAAAATAGAAAGCAATACGAGAAACTTCGCAGGCAATGCCGGAAACTCTTCAAGCAAAGCAATGAAGGCAACAAGTTAAATGAAGTTGGTGAAATCAGCTACGAAGGAGACGATGGAACTCTTTTTAAAGATTCAGGTTCTTCTAGTTCTGATGATGCAGCCAGTGCTAGGGAATCTCTTTCTAGTGAAGATAGGAGCCCTGATGTTGAACATTCAGATAATCCAACCAGTTCCCTGTTGGAAGGAGATGATGTTGCTAATGTCAACAACACTGATGTCTCTACACTGGATACTGATTCCTCTGATTCAGACTCGTCAGAAGGTCCTGAAGTAATTCAAACAGTTCCTTCTGATGATGTTCAGGAAGATAAAAATCCCAACAAAGATTCAGAGGAAGCCTATTCTCCACCCCAAGAAAAAGTCTTGTCAAAGTTACCAACCTCAGAAGATTTTTCCACCTGGCAACGGATAATCCGACTTGATGCGGTACGTGCCAATGCAGAATGGATGGCATACTACCCCTCTCAAGCTGTGGTATCAGACAGTAGGGCTCGTCGTACTGCTGAGGTTGTTGGCTTGAAGGATTATGGTCACCTAGAGGCTGGCAGAATCTTCCATGCTGCACGACTAGTTGCTATTCTAGAAGCGTATGCACTATATGACTCCGAAATTGGCTACTGCCAGGGTATGAGTGACCTGCTATCTCCTATACTTAGTGTTATATCAGAGGATCATGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCACGGCAAAATTTTAGGCTTGATGAGGTGGGTATTCGTAGACAGCTGGATATAGTTGCAAAAATAATCAAGTTTAAGGATGCCCACCTCTTTAGGCATTTGGAGAAGCTTCAAGCTGAGGATTGCTTTTTTGTCTATAGGATGGTGGTGGTGATGTTTCGAAGGGAATTGACATTTGAACAGACTCTTTGCCTATGGGAAGTAATGTGGGCAGATCAAGCAGCAATCAGGGCAGGTATTGGGAAATCTGCATGGAGCAGAATTAGGCAGCGTGCTCCACCAACAGATGATTTATTGCTCTATGCAATTGCAGCTTCAGTATTGCAGAGAAGGAAATTGATCATTGAGAAGTACAGCAGTATGGATGAGATCATTAAGGAATGCAATAGCATGTCAGGACAGCTTGATATTTGGAAACTGCTTGATGATGCACATAACTTAGTTGTCAACCTTCATGACAAAATAGAGACATCATTATCATGA 1689 0.4512 MFTSSHFNINTNTNTNTNSDTTILSAGGAARCTFSLMAAAASPSTPVVLFTALAGVALVAVIFYGASRGRLKSPWSHRKRKNALSPHQWKSFFTEDGRLCDGGIKLLKRVRSGGVDPSIRAEVWPFLLGAYDLDSTRDERDVKRIQNRKQYEKLRRQCRKLFKQSNEGNKLNEVGEISYEGDDGTLFKDSGSSSSDDAASARESLSSEDRSPDVEHSDNPTSSLLEGDDVANVNNTDVSTLDTDSSDSDSSEGPEVIQTVPSDDVQEDKNPNKDSEEAYSPPQEKVLSKLPTSEDFSTWQRIIRLDAVRANAEWMAYYPSQAVVSDSRARRTAEVVGLKDYGHLEAGRIFHAARLVAILEAYALYDSEIGYCQGMSDLLSPILSVISEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDIVAKIIKFKDAHLFRHLEKLQAEDCFFVYRMVVVMFRRELTFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLQRRKLIIEKYSSMDEIIKECNSMSGQLDIWKLLDDAHNLVVNLHDKIETSLS* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0012 562 PANTHER SMALL G PROTEIN SIGNALING MODULATOR 2-LIKE ISOFORM X1 23 557 - -
Apr9g0012 562 Pfam Rab-GTPase-TBC domain 354 474 IPR000195 -
Apr9g0012 562 ProSiteProfiles TBC/rab GAP domain profile. 114 475 IPR000195 -
Apr9g0012 562 MobiDBLite consensus disorder prediction 202 216 - -
Apr9g0012 562 MobiDBLite consensus disorder prediction 266 280 - -
Apr9g0012 562 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 275 407 - -
Apr9g0012 562 Gene3D - 411 557 - -
Apr9g0012 562 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 412 551 IPR035969 -
Apr9g0012 562 MobiDBLite consensus disorder prediction 173 291 - -
Apr9g0012 562 MobiDBLite consensus disorder prediction 217 257 - -
Apr9g0012 562 MobiDBLite consensus disorder prediction 187 201 - -
Apr9g0012 562 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 23 557 - -
Apr9g0012 562 SMART tbc_4 111 501 IPR000195 -
Apr9g0012 562 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 89 435 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0012 Apr-Chr9 236788 240852 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0012 - - aprc:113846503 1021.92