Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0004 ATGGCCATCATCTCTGATTACCAAGAAGAAGATGTTTCTCCCTCCTCTTCCTCCGCTCAATCGCAACCCTCTTCGTTCAGCGCCAGCTTTGATCCCTCCAATCCAATAGCTTTTCTCGACCAAGTCTTCCAATTCGTCGCAAAAGAAAGCGACTTTCTCGAAAAGGACGCCGCTGAGAACGAGATCGTGTCGGCGGCGCGCGCTGCCAAGGCCAAGAAGGAAAAGATCGCCGCCGAAGAGAAAGCGACGGCGGAGAAAAAGTTGAAGGAAGAGAAAGCGGCGGCTGCGACTACGACAACTAAGAAAGAAAAGGAAGTTGGAGCAAAAGAAGAAAAGAAGAAGGGCCAAGAAAGTACTACAATCGTGCCGAACAAAGGAAATGGCCTTGATCTGGAAAAATATTCTTGGACTCAGACTCTACAGGAAGTCAATGTGAGTGTTCCTGTGCCTACTGGAACAAAATCAAGATTTGTTATTTGTGAGATAAAGAAGAACCATCTGAAAGTTGGACTAAAAGGCCAGCCACCAATTATTGATGGGGAGGTTTATCGACCCGTCAAGCCTGATGACTGTTACTGGAGCATAGAGGATCAGAATACAGTTTCTATTCTTTTGACCAAGCATGATCAAATGGAGTGGTGGAAATGTGTGGTGAAGGGTGATCCTGAAATTGATACCCAAAAGGTTGAACCTGAGAACAGCAAACTTTCTGACCTGGATCCCGAGACTCGTCAGACTGTTGAAAAAATGATGTTTGACCAGAAGCAGAAGTCTATGGGCCTCCCTTCTAGTGATGAGCTCCAGAAGCAGGATATCTTGAAGAAATTTATGAGTGAGCATCCAGAGATGGACTTCTCAAGAGCAAAAATATCATAA 876 0.4543 MAIISDYQEEDVSPSSSSAQSQPSSFSASFDPSNPIAFLDQVFQFVAKESDFLEKDAAENEIVSAARAAKAKKEKIAAEEKATAEKKLKEEKAAAATTTTKKEKEVGAKEEKKKGQESTTIVPNKGNGLDLEKYSWTQTLQEVNVSVPVPTGTKSRFVICEIKKNHLKVGLKGQPPIIDGEVYRPVKPDDCYWSIEDQNTVSILLTKHDQMEWWKCVVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQKQKSMGLPSSDELQKQDILKKFMSEHPEMDFSRAKIS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0004 291 Pfam CS domain 133 207 IPR007052 -
Apr9g0004 291 SUPERFAMILY HSP20-like chaperones 118 233 IPR008978 -
Apr9g0004 291 MobiDBLite consensus disorder prediction 1 30 - -
Apr9g0004 291 ProSiteProfiles CS domain profile. 129 218 IPR007052 -
Apr9g0004 291 CDD p23_NUDC_like 134 218 - -
Apr9g0004 291 MobiDBLite consensus disorder prediction 83 124 - -
Apr9g0004 291 Gene3D - 125 252 IPR008978 -
Apr9g0004 291 MobiDBLite consensus disorder prediction 83 118 - -
Apr9g0004 291 Coils Coil 55 94 - -
Apr9g0004 291 MobiDBLite consensus disorder prediction 9 30 - -
Apr9g0004 291 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 1 289 IPR037898 -
Apr9g0004 291 PANTHER PROTEIN BOBBER 2 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0004 Apr-Chr9 129848 132060 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0004 K25866 - rcu:8274345 373.244