Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2660 ATGAAGAAAAGATCCATATCAACCCTCTATAAGGCACTTCCCGATCTCTGCAATCGCGAACTCGGCCACCTACCACCTAGAAATTTCGTTCATCGTCTCGCTGCCTCCGAGGATCTTGTGCTTCGGCTTGATGTGCTAAGGAAGCTGGAAAAGCACAGAGGTTGTGTGAACACTGTGAGCTTCAATGCAGATGGTGACATTCTGGTGTCGGGTTCTGATGACAGGAGGGTTATTCTCTGGGACTGGGAAACTGGTCGAATTAGACTCTCTTTCCATTCTGGTCACAGTAACAATGTTTTCCAGGCAAAGATCATGCCTCATTCCGATGATCAAAGCATCGTCACCTGTGCTGCTGATGGACAGGTGAGGCATGCTCAAATTCTTGAAAATGGAGGAGTTGAAACTAAGTTACTGGCCAAGCATCAAGGAAGGGCTCATAAATTGGCTATTGAGCCAGGTAGCCCTCATATATTTTATACCTGTGGTGAAGATGGATTGGTACAGCATTTTGATCTGAGAACTGGGGTTGCAACAGAACTTTTTACGTGCCAACCAATTAAAGACAGATGGAATTACATGCCAGTCATCCATCTTAATGCAATTGCAATTGATCCAAGGAACCCAAATTTCTTTGCGGTTGCTGGGTCTGATGAGTATGCTCGACTTTATGATATTCGCAAGTACAAGTGGGATGGATCAACTGATTTTGGTCAACCAACTGACTTCTTTTGCCCTCCACACTTGATTGGCGATGAGCGGGTTGGAATAACAGGCTTGGCCTTTTCTGAACAAAGAGAGCTGCTTGTGTCATACAATGATGAGTTTATTTACCTATTTACACAAGATATGGGTTTGGGACCAAACCCTGCTCCTGGGTCCCCTAAATCTATGAGCAGTGATTCAAGTGAAATAGGAGGTAGTCATTGTTCTGTGGCATCTCCATCAAACATGGATGCTGATGAGAAAATCACCCCACAAGTTTTTAAGGGACACAGGAATCGTGAGACAGTGAAGGGTGTTAACTTTTTTGGACCTAAATGTGAGTATGTAGTGAGTGGGTCTGACTGTGGTCGGATTTTCATATGGAAAAAGAAAGGTGGTCAGCTTGTTCGTGTCATGGAAGCAGATAAGCATGTTGTGAACTGCATTGAGTCTCATCCTCATACAATGGTTCTTGCAAGCAGTGGTATTGAGCATGACGTTAAGATATGGACTCCAAAGGCCCATGAGAAAGCTACTTTGCCCAAAAATATTGAGCAGAAACCCAAGGCTAGGGGCTGGATGTACCGGATAGCTTCTCCTGAAGACCTGATGTTGCAACTGTTTTCACTTCCAAGACGAAGGATTCGGACAGAAAGTGGCGGCGAAAACTCAGCTGCTGGTCGAGACCTTCTAGAGTTGATATTGACATTCAATGCAAATAGTGACAGTTCTAACGATGATGATGATGATGATGATGATGATGGAGGAGATACAACCAGCCAAGAGGACTTGTTCAGTTGA 1503 0.4444 MKKRSISTLYKALPDLCNRELGHLPPRNFVHRLAASEDLVLRLDVLRKLEKHRGCVNTVSFNADGDILVSGSDDRRVILWDWETGRIRLSFHSGHSNNVFQAKIMPHSDDQSIVTCAADGQVRHAQILENGGVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGVATELFTCQPIKDRWNYMPVIHLNAIAIDPRNPNFFAVAGSDEYARLYDIRKYKWDGSTDFGQPTDFFCPPHLIGDERVGITGLAFSEQRELLVSYNDEFIYLFTQDMGLGPNPAPGSPKSMSSDSSEIGGSHCSVASPSNMDADEKITPQVFKGHRNRETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGQLVRVMEADKHVVNCIESHPHTMVLASSGIEHDVKIWTPKAHEKATLPKNIEQKPKARGWMYRIASPEDLMLQLFSLPRRRIRTESGGENSAAGRDLLELILTFNANSDSSNDDDDDDDDDGGDTTSQEDLFS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2660 500 MobiDBLite consensus disorder prediction 292 311 - -
Apr8g2660 500 Pfam WD domain, G-beta repeat 326 363 IPR001680 GO:0005515
Apr8g2660 500 Pfam WD domain, G-beta repeat 46 81 IPR001680 GO:0005515
Apr8g2660 500 MobiDBLite consensus disorder prediction 288 311 - -
Apr8g2660 500 SUPERFAMILY WD40 repeat-like 41 404 IPR036322 GO:0005515
Apr8g2660 500 Gene3D - 36 407 IPR015943 GO:0005515
Apr8g2660 500 ProSiteProfiles Trp-Asp (WD) repeats profile. 49 90 IPR001680 GO:0005515
Apr8g2660 500 MobiDBLite consensus disorder prediction 473 500 - -
Apr8g2660 500 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 49 86 - -
Apr8g2660 500 PANTHER WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN-CONTAINING PROTEIN-RELATED 11 480 - -
Apr8g2660 500 SMART WD40_4 321 363 IPR001680 GO:0005515
Apr8g2660 500 SMART WD40_4 366 405 IPR001680 GO:0005515
Apr8g2660 500 SMART WD40_4 42 81 IPR001680 GO:0005515
Apr8g2660 500 SMART WD40_4 131 171 IPR001680 GO:0005515
Apr8g2660 500 SMART WD40_4 189 224 IPR001680 GO:0005515
Apr8g2660 500 SMART WD40_4 84 126 IPR001680 GO:0005515
Apr8g2660 500 SMART WD40_4 242 280 IPR001680 GO:0005515
Apr8g2660 500 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 11 480 IPR045151 -
Apr8g2660 500 MobiDBLite consensus disorder prediction 477 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2660 Apr-Chr8 36372613 36377681 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2660 K11804 - gmx:100791300 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2660 8 36372613 36377681 Apr8g2660 8 36372613 36377681 ECH