Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2657 ATGGGTAGCTTGAAAATATCACCGTCAACAAGCACTAGCAGCCCTAAGAAAAACTCAAGAACACTTCATGACCTGTTTGTGCAGGAAAATCCTCATTTTGCGATCCCATGTTCTCCTGCTTCAGGAAATGAAGAACTTCTATCTGCTATATCTTACTGCACCTTTGTGTTCACCTTCACTGATCCTTCAGAATCTCCTGCACAAAGAGACTCCAAGAGGTGCCATCTATCAAGGCTCATCTCTATATTGAAGTCCTCCAAGAAGCCAGTGCATGGCAAAGTTTTGGAGCCTCTTGTGATCATGATCTCAGCCAATCTATTTAGGCCACTCCCTCCACCTGCTAACCCTTCTGCCATCTCAGACTTGGCTGAAGAAGAAGACCCCATCTCCACATTTTCACCCCTTTGGTCACATCTCCAAATAGTTTATGAAATCCTTCTCAGGCTTGTTAACTGCCAAGAGCATAACATACTGAGAGAGTACATGGATCATTCTTTTCTCCGCAATCTCCTAGCACTATTCCACTCTGAAGATCCAAGGGAACGTGAGAGTTTGAAAAATGTGTACCACAAGATATATTCTAAGTTCATCTCTGACCGTTCCTTCATGAGGAAAATAATGACCGATGTGCTCTTGAATTATGTGTTTGAGACAGAGAAGCATCCTGGTGTTGGGGACTTGCTTGAGATATGGGGAACCATAATCAATGGCTTTACCGTGCCACTCAAGGAAGAGCACAAGCTTTTCCTAATGAGAGTGCTTATTCCTCTGCACAAGACAAAAGGGATGCTAGTTTACCATAGACAACTGGCTTATTGCGTATCACAGTTTGTGCAGAAGGAACCTATGCTTGGAGGTGTTGTTGTTAGAGGAATTTTGAAGTACTGGCCTGTCACAAACTGTCAAAAAGAAATCTTGCTAATTGGGGAGTTGGAGGATCTGGTGGAGAATATTGACCCTGACCAGTACCGTAAGTTGTCCTTACCCTTGTGTACGCAGATTACAAAATGCATAAACAGTTGGAATTCCCAGGTAGCTGAGCGTGCACTCTACGTATGGAACAATGAGCAGTTCGTGAAAATGGCATTAATAGGAACTGTGGAAGTATTTACTGTGATTGTAGAAGGGATGGAAAAGAACCTGAAGCGGCATTGGAGCAAAAATGTAAGGCAACTAACAGAAAGTGTGAAGGTGATGCTGGCAGAAATGGATCCAGATCTATATTCAAAGGGTGTCATGGACATGGAAACCAAAGAATCAATGGCAAATCAAGAAGATATGAAGAGAAAAAAGAGATGGGAAATAATAGAATTGGAAGCTGCCAAGAATCAGTTTTTCAATCCACAACGATATATACGTGTCTCCCACTGA 1371 0.4252 MGSLKISPSTSTSSPKKNSRTLHDLFVQENPHFAIPCSPASGNEELLSAISYCTFVFTFTDPSESPAQRDSKRCHLSRLISILKSSKKPVHGKVLEPLVIMISANLFRPLPPPANPSAISDLAEEEDPISTFSPLWSHLQIVYEILLRLVNCQEHNILREYMDHSFLRNLLALFHSEDPRERESLKNVYHKIYSKFISDRSFMRKIMTDVLLNYVFETEKHPGVGDLLEIWGTIINGFTVPLKEEHKLFLMRVLIPLHKTKGMLVYHRQLAYCVSQFVQKEPMLGGVVVRGILKYWPVTNCQKEILLIGELEDLVENIDPDQYRKLSLPLCTQITKCINSWNSQVAERALYVWNNEQFVKMALIGTVEVFTVIVEGMEKNLKRHWSKNVRQLTESVKVMLAEMDPDLYSKGVMDMETKESMANQEDMKRKKRWEIIELEAAKNQFFNPQRYIRVSH* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2657 456 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 36 440 IPR002554 GO:0000159|GO:0007165|GO:0019888
Apr8g2657 456 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 11 441 - -
Apr8g2657 456 MobiDBLite consensus disorder prediction 1 20 - -
Apr8g2657 456 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 11 441 IPR002554 GO:0000159|GO:0007165|GO:0019888
Apr8g2657 456 SUPERFAMILY ARM repeat 44 419 IPR016024 -
Apr8g2657 456 Gene3D - 39 438 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2657 Apr-Chr8 36348804 36351168 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2657 K11584 - gmx:100802007 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2657 8 36348804 36351168 Apr8g2657 8 36348804 36351168 ECH