Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2656 ATGGCGGCGGCGGCGGCGACTCCATCGTGGCAGCCTCAGGAACAAGGGTTCAAGGAGATCTGCGGTCTCCTGGAGCAGCAGATTTCACATTCTTCTTCCGCTGACAAGGCTCAGATTTGGCAACACCTTCAGCACTACTCTCACCTCCCTGACTTCAACAATTACCTCGCCTTCATCTTCTCCCGTGCTGAGGGGAAATCAGTGGAGATTCGCCAGGCTGCTGGTTTATATCTGAAGAATAACCTCAGAAACACATACAAATCTATGCCGCCTACGTACCAACAATACGTGAAATCAGAGTTGCTGCCTTGTCTTGGTGCAGCAGATAAGCACATAAGATCTACCACAGGAACTGTTATTAGTGTTGTTGTTCAAATAGGTGGAGTAGTTGGGTGGCCTGAATTGTTGCAAGCCCTTGTAAATTGCTTAGACAGTAATGATCTGAATCACATGGAAGGTGCAATGGATGCATTATCCAAGATTTGTGAAGATATTCCCCAATATCTTGATTCTGATGTACCAGGATTAGCGGAACGCCCTATTAACATATTTCTTCCTAGATTATTTCGGTTTTTCCAATCACCACATGCTTCATTGAGAAAGCTATCATTGGGTTCTGTAAATCAATACATTATGTTAATGCCTTCTGCCTTGTATGCATCCATGGATCAATATCTTCAAGGTCTGTTTATTCTTGCAAATGATCCTGCTGCAGAAGTGCGGAAGTTGGTTTGTGCGGCATTTGTTCAGATAATTGAAGTCCGTCCATCTTTCTTGGAGCCACATTTGCGGAATGTGATTGAATACATGTTACAAGTCAACAAGGACACAGATGATGAAGTAGCCCTTGAAGCCTGTGAATTTTGGTCTGCTTATTGTGATGCTCAGCTGCCACCTGAAAACTTAAGAGAATTCTTGCCACGTCTTATTCCAGTTTTGTTGTCAAACATGGCCTATGCAGATGATGATGAATCACTTATTGAAGCTGAGGAAGATGGATCTCAACCCGATCGAGATCAGGACATTAAACCTCGGTTTCATGTATCAAGGTTTCATGGATCAGATGAAGTAGAAGAAGATGATGATGATGTTGTCAACACATGGAATTTACGGAAATGCAGTGCAGCTGCTCTAGATATTCTATCAAATGTTTTTGGAGATGAGATCCTTCCGACTTTGATGCCTATTGTTGAGGCTAAGCTGTCTACTGGTGGGGATGATGCTTGGAAAGAAAGGGAAGCTGCTGTCTTGGCTCTTGGTGCCATAGGGGAGGGTTGCATCAATGGTCTTTACCCTCATCTGTTGGAGATTGTGGCATTTCTTATCCCTCTTCTTGATGATAAGTTTCCTCTTATACGAAGTATTTCGTGCTGGACACTATCTCGGTTTAGCAAGTTTATTGTTCAGGGTATTGGGCATCCTAAAGGCTATGAACAATTTGACAATGTTCTTATGGGTCTTCTACGGAGAATTTTGGATGATAATAAGCGTGTCCAAGAGGCTGCTTGCTCAGCTTTTGCTACACTGGAAGAGGAGGCTGCTGAAGAGTTGGCACCACGTTTGGAAATTATATTGAAGCACCTGATGATTGCTTTTGGGAAATATCAGAGGCGAAACCTCAGGATTGTATATGATGCTATTGGAACTCTTGCTGAAGCTGTTGGAGGCGAGCTGAATCAGGCTGTTTATCTTGACATTCTTATGCCACCATTAATTGAGAAGTGGCAACAGCTTTCAAATTCAGACAAAGATCTTTTTCCACTCCTGGAATGCTTTACATCTATAGCACATGCCCTGGGTACTGGTTTCACTCAATTTGCAGAACCTGTTTTTAGGAGGTGCATAAATATAATCCAGACCCAACAATTTGCTAAGGCTGATCCTGTTGCAGCTGGGGTTCAGTATGACAAGGAGTTCATTGTATGCTCTCTTGATCTGCTTTCTGGACTAGCAGAGGGTCTTGGCAGTGGAATAGAGAGTTTGGTTGCACAATGTTCTTTGAGGGACCTACTCTTGCATTGTTGTGTGGATGATGCTCCTGATGTTCGACAAAGTGCCTTTGCCTTACTTGGAGACCTTGCACGAGTTTGCCCAATTCATTTGCAACCTCGTTTGTCTGAGTTTCTTGAGTCTGCAGCCAAGCAGCTGGAAATTTCAAAGGTAAAGGAGGCTATTTCTGTAGCAAATAATGCATGCTGGGCAATTGGAGAATTAGCAGTTAAGGTTCGTCAAGAAATTTCTCCCATTGTTTTAACCGTAATTTCATGCCTGGTCCCAATTCTTCAGCATGCTGAGGGACTCAACAAGTCACTTATAGAAAATAGTGCAATAACACTGGGTAGGCTTGCGTGGGTCTGTCCAGAACTTGTATCACCACATATGGAGCATTTTATGCAATCTTGGTGCAGTGCTTTGTCAATGATACGAGATGATGTTGAGAAAGAGGATGCTTTTAGAGGTCTATGTGCTATGGTCAAAGTTAATCCATCTGGAGCTCTAAGTTCGCTTGTATACATGTGCAAAGCCATTGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGAAGTCTGCCAGATATTGCATGGGTACAAACAGATGCTGCGCAATGGAGCATGGGACCAATGTGCCTAG 2637 0.4323 MAAAAATPSWQPQEQGFKEICGLLEQQISHSSSADKAQIWQHLQHYSHLPDFNNYLAFIFSRAEGKSVEIRQAAGLYLKNNLRNTYKSMPPTYQQYVKSELLPCLGAADKHIRSTTGTVISVVVQIGGVVGWPELLQALVNCLDSNDLNHMEGAMDALSKICEDIPQYLDSDVPGLAERPINIFLPRLFRFFQSPHASLRKLSLGSVNQYIMLMPSALYASMDQYLQGLFILANDPAAEVRKLVCAAFVQIIEVRPSFLEPHLRNVIEYMLQVNKDTDDEVALEACEFWSAYCDAQLPPENLREFLPRLIPVLLSNMAYADDDESLIEAEEDGSQPDRDQDIKPRFHVSRFHGSDEVEEDDDDVVNTWNLRKCSAAALDILSNVFGDEILPTLMPIVEAKLSTGGDDAWKEREAAVLALGAIGEGCINGLYPHLLEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQGIGHPKGYEQFDNVLMGLLRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEIILKHLMIAFGKYQRRNLRIVYDAIGTLAEAVGGELNQAVYLDILMPPLIEKWQQLSNSDKDLFPLLECFTSIAHALGTGFTQFAEPVFRRCINIIQTQQFAKADPVAAGVQYDKEFIVCSLDLLSGLAEGLGSGIESLVAQCSLRDLLLHCCVDDAPDVRQSAFALLGDLARVCPIHLQPRLSEFLESAAKQLEISKVKEAISVANNACWAIGELAVKVRQEISPIVLTVISCLVPILQHAEGLNKSLIENSAITLGRLAWVCPELVSPHMEHFMQSWCSALSMIRDDVEKEDAFRGLCAMVKVNPSGALSSLVYMCKAIASWHEIRSEDLHNEVCQILHGYKQMLRNGAWDQCA* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2656 878 Gene3D - 7 878 IPR011989 -
Apr8g2656 878 PANTHER IMPORTIN BETA 10 877 IPR040122 GO:0006606
Apr8g2656 878 Pfam HEAT-like repeat 409 462 - -
Apr8g2656 878 PANTHER TRANSPORTIN 1 ISOFORM 1 10 877 - -
Apr8g2656 878 Pfam Importin-beta N-terminal domain 40 106 IPR001494 GO:0006886|GO:0031267
Apr8g2656 878 SMART IBN_N_2 39 107 IPR001494 GO:0006886|GO:0031267
Apr8g2656 878 Pfam HEAT repeat 669 697 IPR000357 GO:0005515
Apr8g2656 878 SUPERFAMILY ARM repeat 10 876 IPR016024 -
Apr8g2656 878 ProSiteProfiles Importin-beta N-terminal domain profile. 39 107 IPR001494 GO:0006886|GO:0031267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2656 K18752 - gmx:100792702 1647.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2656 8 36332545 36347986 Apr8g2656 8 36332545 36347986 ECH