Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2619 ATGTTTCTCACAAGGACTGAGTATGACCGAGGAGTCAACACCTTTTCTCCTGAAGGCCGTTTGTTTCAGGTTGAATATGCAATCGAGGCCATCAAGCTGGGATCAACTGCGATTGGGTTGAAGACGAAAGAGGGCGTCGTCCTTGCAGAGCCTAGTAGTGTGGAGAAAATTATGGAAATTGATGAGCATATAGGTTGTGCAATGAGTGGATTGATTGCTGATGCTCGAACACTTGTTGAGCATGCACGGGTGGAAACTCAGAATCATAGGTTCTCCTATGGTGAACCAATGACTGTTGAGTCCACTACCCAAGCACTTTGTGATCTAGCCTTGCGTTTTGGTGAAGGTGATGAAGAGTCCATGTCTCGACCGTTTGGAGTATCTCTCCTCATTGCTGGACATGATGAGAATGGACCTAGTTTATATTACACTGATCCATCTGGCACATTTTGGCAATGCAATGCAAAAGCTATCGGTTCAGGTTCAGAAGGTGCAGATAGTTCTCTGCAAGAACAGTACAACAAGGACCTAACCCTTCAAGAAGCCGAGACTATTGCTTTATCCATTTTGAAGCAAGTCATGGAAGAGAAGGTCACTCCTAACAACGTTGACATTGCCAAGGTGGCTCCAACATATCATCTTTATACCCCCTCTGAGGTGGAAGCTGTCATAAGTCGTCTATGA 684 0.4518 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2619 227 Pfam Proteasome subunit 31 208 IPR001353 GO:0005839|GO:0051603
Apr8g2619 227 Pfam Proteasome subunit A N-terminal signature 8 30 IPR000426 GO:0006511|GO:0019773
Apr8g2619 227 ProSiteProfiles Proteasome alpha-type subunit profile. 23 224 IPR023332 -
Apr8g2619 227 CDD proteasome_alpha_type_5 8 208 IPR033812 GO:0019773|GO:0043161
Apr8g2619 227 SMART Proteasome_A_N_2 8 30 IPR000426 GO:0006511|GO:0019773
Apr8g2619 227 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 227 - -
Apr8g2619 227 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 7 224 IPR029055 -
Apr8g2619 227 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 227 IPR029055 -
Apr8g2619 227 ProSitePatterns Proteasome alpha-type subunits signature. 8 30 IPR000426 GO:0006511|GO:0019773
Apr8g2619 227 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2619 Apr-Chr8 36035737 36041719 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2619 K02729 - gmx:100796147 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2619 8 36035737 36041719 Apr8g2619 8 36035737 36041719 ECH