Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2473 ATGGGTGTTCTTGATTACCTTTCAGATCACTTCTCTGTTTCCACTTCGAAAAAGAAACGCAAACCAATGCAGGTGAAAATGGACTGTGATGGCTGTGAAAGAAGAGTTCGGAACTCTGTTTCCAACATGTCAGGTGTGAAGCAAGTAGAGGTGAATAGAAAGCAAAGCAAGGTAACTGTGACAGGTTACGTGGATAGAAACAAGGTCCTAAAGAAAGTGAAGAGCACAGGAAAGAGAGCTGAATTTTGGCCCTATATTCAATATAACTTGGTGGCATATCCCTATGTAGCACAGGCATACGACAAGAAAGCACCTTCTGGGTATGTGAGAAACACTGAACTAGCTCTTCCTAACCCAAATGCACCCGATGAGAAGCTCGCCACTCTCTTCAGCGATGATAACCCTAACGCATGTTCAATTATGTAA 426 0.4296 MGVLDYLSDHFSVSTSKKKRKPMQVKMDCDGCERRVRNSVSNMSGVKQVEVNRKQSKVTVTGYVDRNKVLKKVKSTGKRAEFWPYIQYNLVAYPYVAQAYDKKAPSGYVRNTELALPNPNAPDEKLATLFSDDNPNACSIM* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2473 141 Pfam Heavy-metal-associated domain 25 78 IPR006121 GO:0046872
Apr8g2473 141 Gene3D - 16 81 - -
Apr8g2473 141 ProSiteProfiles Heavy-metal-associated domain profile. 27 82 IPR006121 GO:0046872
Apr8g2473 141 SUPERFAMILY HMA, heavy metal-associated domain 23 84 IPR036163 GO:0046872
Apr8g2473 141 CDD HMA 27 81 IPR006121 GO:0046872
Apr8g2473 141 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 141 IPR045181 GO:0046872
Apr8g2473 141 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2473 Apr-Chr8 34742832 34744260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2473 - - gmx:100798163 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2473 8 34742832 34744260 Apr8g2473 8 34742832 34744260 ECH