Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2465 ATGCAAAACCTCAATTTACTTTGCCTTACTATAATTTACCTTTCTCTATTTCCCTTTCACACAAGCAACTCCATCGTGCAAGCCCTCACGTTAGCCTCAGATATAGCAGCCTTGAAAGCCTTCAAGGCCTCAATCAAACCCTCTTCCATCACCCCATGGTCATGCCTAGCATCATGGAACTTCACCACCGATCCATGCTCACTCCCTCGCCGCACCCACTTCATATGCGGCCTCACCTGCAACCCTGACTACACCCGAATCAATCAAATCACACTCGACCCCGCAGGTTACTCAGCCACACTAACCCCACTCATCTCTCAACTCACTCAACTCGTAACTCTAGACCTCGCCGACAACTCCTTCTTCGGCCCAATCCCCTCTTCAATTTCTTCCCTCTCCAACCTCCAAACCTTTACCCTACGATCCAATTCCTTTACCGGTTCAATCCCTCCTTCCATAACCAACCTCAAATCTCTCCAGTCTCTCGACCTTTCACAAAATTCCCTTTCTGGGTCTCTTCCAAACTCCTTCAATTCCCTCACCAGCATCCGCAGAATCGATCTCAGCTTCAATAAACTAACCGGTTCAATCCCCAAACTACCACCCAACTTGCTAGAACTCGCGATCAAGACCAATTCTCTATCTGGGCCACTCCAAAAACAAGACTTCGAGGGGTTGAACCAATTGGAAGTGGTGGAACTAAGCGAAAACGCACTCACCGGAACGGTAGAGTCTTGGTTCTTTCTCTTGCCGTCGCTGCAGCAAGTGAATTTGGCCAACAACAGCTTCACGGGAGTTCAGATCTCGAGACCCGCTGGAGGAGGAAGTAACCTCGTGGCACTCAACCTCGGGTTTAACAGAATACAAGGTTATGCGCCCGCGAATCTCGCCGCGTATCCGATTTTGTCGTTTCTGTCTATTCGTCACAACTCGCTACGTGGCACGATCCCACTGGAGTACGGCAAGATCAAGTCCATGAAGAGGTTGTTCTTAGACGGTAACTACCTCGTCGGGAAGCCGCCGTCAGAGTTATTCGCCGCCGGCACGACGGTTTCCGGTAGCTTGGGGGACAACTGTTTACAAGGTTGTCCAATGTCTTCACAGCTGTGCACGCCTGCACAAAAACCCACCTCTGTTTGCAAACAAGCCTACCGTGGAAGACCGAAACCGTAG 1173 0.503 MQNLNLLCLTIIYLSLFPFHTSNSIVQALTLASDIAALKAFKASIKPSSITPWSCLASWNFTTDPCSLPRRTHFICGLTCNPDYTRINQITLDPAGYSATLTPLISQLTQLVTLDLADNSFFGPIPSSISSLSNLQTFTLRSNSFTGSIPPSITNLKSLQSLDLSQNSLSGSLPNSFNSLTSIRRIDLSFNKLTGSIPKLPPNLLELAIKTNSLSGPLQKQDFEGLNQLEVVELSENALTGTVESWFFLLPSLQQVNLANNSFTGVQISRPAGGGSNLVALNLGFNRIQGYAPANLAAYPILSFLSIRHNSLRGTIPLEYGKIKSMKRLFLDGNYLVGKPPSELFAAGTTVSGSLGDNCLQGCPMSSQLCTPAQKPTSVCKQAYRGRPKP* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2465 390 Pfam Leucine rich repeat 133 193 IPR001611 GO:0005515
Apr8g2465 390 Pfam Leucine rich repeat 202 262 IPR001611 GO:0005515
Apr8g2465 390 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 13 389 - -
Apr8g2465 390 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
Apr8g2465 390 Gene3D Ribonuclease Inhibitor 202 374 IPR032675 -
Apr8g2465 390 Pfam Leucine Rich Repeat 111 132 IPR001611 GO:0005515
Apr8g2465 390 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 13 389 - -
Apr8g2465 390 PRINTS Leucine-rich repeat signature 159 172 - -
Apr8g2465 390 PRINTS Leucine-rich repeat signature 180 193 - -
Apr8g2465 390 ProSiteProfiles Leucine-rich repeat profile. 158 180 IPR001611 GO:0005515
Apr8g2465 390 SMART LRR_typ_2 180 207 IPR003591 -
Apr8g2465 390 SMART LRR_typ_2 250 271 IPR003591 -
Apr8g2465 390 SMART LRR_typ_2 226 249 IPR003591 -
Apr8g2465 390 SMART LRR_typ_2 108 132 IPR003591 -
Apr8g2465 390 SMART LRR_typ_2 156 179 IPR003591 -
Apr8g2465 390 SUPERFAMILY L domain-like 75 360 - -
Apr8g2465 390 Gene3D Ribonuclease Inhibitor 32 201 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2465 37 384 Receptor kinase-like Gene Family AT3G05360 31.522 1.28e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2465 - - gmx:100801713 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2465 8 34669247 34671014 Apr8g2465 8 34669247 34671014 ECH