Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2450 ATGATCGGGTCCGAAGCTCCCATTAACGTCTTCATGGTGTCCTTTCCAGCACAAGGCCACATAAACCCTTTGCTAAGACTAGGTAAGTTCCTCGCTGCAAAGGGTTTGTTCGTAACCTTTGCCACCTCAGAGACCGCTGGTAAAGACATGCGAACCGCTAACTCCATCAGTGACACATCAGTGACTCCAGTTGGTGATGGTTTTCTCAAGTTCGATTTCTTTGAAGACGGTTTAGCAGATGATGATCCCATTAAGAAAGAACTCAGTGATTACTGTGCTCATCTTGAGCTTGTTGGGAAGCAATACGTTTCCCACATGATCAAGAAGCATGCTGAGGAAAACAACCCAATATCATGTATCATAAACAACCCTTTTCTTCCATGGGTTTGTGGTGTAGCTGCTGAACATGGTATTCCTTCTGCTTTGCTTTGGATTCAGTCTAGTGCTGTTTTCACCGCATATTATAGTTATTTCCACAAACTGGTACGTTTCCCGTCACACGATGAGCCTTATATTGATGTTCATTTGCCTTCTATAGTCCTTAAGTATAATGAAGTCCCAGATTTTCTGCACCCGTCTAGTCCATATCCATTTCTTGGGACACTCATATTGGAACAGTTTAAGAACTTGTCCATACCGTTCTGCGTGTTGGTGGACACCTTTGAGGAACTAGAGCATGATTACATCAACTATATTTCAAAGTTTGTGCTTATGAGACCCATCGGTCCTTTGTTCAAAAACCCAAAAGCAAAAGGATCGAGAGATATACGTGGTGATTTCATGAAGAGTGATGATTGTATGGAGTGGTTGAACTCGAAGGACTCAGCATCTGTGGTGTATATCTCTTTTGGAACTATTGTGTTTCTGCCTCAAGAACAAGTGACTGAGATTGCACATGGACTTCTGGAGTCTAAAGTCTCATTTTTGTGGGTGATAAAGCCACCTCTTTTGGAATTGGGGCTTCAGCCTCATGTTCTGCCAGATGGGTTCTTGGAGGGAACAAGAGACAAAGGAAAAGTGGTGCAGTGGAGCCCACAAGAAGAAGTGCTGGCTCATCCTTCCGTGGCATGTTTTATGACACATTGTGGCTGGAACTCTTCAATGGAAGCACTAACATTGGGAGTGCCGATGTTGACATTTCCAGCATGGGGTGACCAAGTCACAAATGCAAAGTTCTTGGTAGACGTTTATGGGGTAGGGATTAAGTTGGGTTATAGTCAGTCTGAAAAGAAAGTGGTAAGCAGAGAAGAGGTGAAGAAGTGCTTGTTGGAAGCAATTGTCGGGCCAAAAGCAGAGGAGTTGAAGCGAAACGCGTTGAAGTGGAAAAGGGTTGCAGAGGCTGCAGTGGATGACGGTGGGTCCTCTGACGGACATCTTGATGCATTCGTGGAGGATGTGAAAAGACGTGGCGCTTTTGGCATCAACAAGATATAA 1434 0.4435 MIGSEAPINVFMVSFPAQGHINPLLRLGKFLAAKGLFVTFATSETAGKDMRTANSISDTSVTPVGDGFLKFDFFEDGLADDDPIKKELSDYCAHLELVGKQYVSHMIKKHAEENNPISCIINNPFLPWVCGVAAEHGIPSALLWIQSSAVFTAYYSYFHKLVRFPSHDEPYIDVHLPSIVLKYNEVPDFLHPSSPYPFLGTLILEQFKNLSIPFCVLVDTFEELEHDYINYISKFVLMRPIGPLFKNPKAKGSRDIRGDFMKSDDCMEWLNSKDSASVVYISFGTIVFLPQEQVTEIAHGLLESKVSFLWVIKPPLLELGLQPHVLPDGFLEGTRDKGKVVQWSPQEEVLAHPSVACFMTHCGWNSSMEALTLGVPMLTFPAWGDQVTNAKFLVDVYGVGIKLGYSQSEKKVVSREEVKKCLLEAIVGPKAEELKRNALKWKRVAEAAVDDGGSSDGHLDAFVEDVKRRGAFGINKI* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2450 477 CDD GT1_Gtf-like 9 448 IPR002213 GO:0008194
Apr8g2450 477 ProSitePatterns UDP-glycosyltransferases signature. 343 386 IPR035595 -
Apr8g2450 477 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 262 403 IPR002213 GO:0008194
Apr8g2450 477 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 470 - -
Apr8g2450 477 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 6 470 - -
Apr8g2450 477 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 470 - -
Apr8g2450 477 Gene3D Glycogen Phosphorylase B; 254 447 - -
Apr8g2450 477 Gene3D Glycogen Phosphorylase B; 12 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2450 Apr-Chr8 34570944 34573195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2450 4 466 Glycosyltransferase AT4G15480 54.721 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2450 - K23279 gmx:100804361 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2450 8 34570944 34573195 Apr8g2450 8 34570944 34573195 ECH