Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2449 ATGGAGAGGTTGTTGTTGGCCATAACTGTCTCCATACTATTGGGAGAGGCCGTTAACGGTTTCGACGGCGGTAACCGCCCAAAACAGAAACACAGTTTGTGTGAGGAGCTGATTCTCCCCGCCGGTTACCCATGCTCCGAATACACCACTCAGACGAAGGATGGTTTCTTGCTGGGCCTTCAGCGCGTGTCTTCTTCTTCCTCCCTCAGTCTTGGGAATGACGGAGAACGAGGTCCTCCGGTTCTGCTTCTGCATGGCTTATTCATGGCAGGTGATGCATGGTTTCTAAATACTCCAAATCAATCACTTGGCTTCATACTTGCAGATCATGGTTTTGATGTTTGGGTAGGAAATGTGCGTGGAACACGCTGGAGCCATGGGCATATATCTTTATTAGAGAAGAATAAGCATTTTTGGGATTGGAGTTGGCAGGATTTGGCCCTGTATGATCTTGCAGAAATGATCAATTACATTAATAAAGTGACAAACTCAAAGCTTTTTGTAGTTGGGCATTCACAGGGGACAATTATATCTTTTGCTGCCTTCACTCAACCCAAGATTGTAGAGAAGGTTAAAGCTGCAGCTCTTCTATCTCCAATTTCATACTTGGATCATGTCAGTGCACCTCTTGTACTTAGAATGGTTAAGATGCACATTGATCAGATGATTCTTGGCATGGGTATTCATCAACTGAACTTCAAAAGCGAATGGGGAGCCAGTCTCCTGGTTTCCATGTGTGACACCCGTCTAAGTTGCAATGACATGATTTCCTCCATAACAGGGAAGAATTGTTGCTTCAATGAGTCACGTGTGGATTTTTATCTTGAACAAGAACCTCATCCATCGTCCTCCAAAAACTTGCACCACCTTTTCCAGATGATCCGCAAAGGTACCTTCTCCAAGTATGATTATGGAAAGCTCAAAAATCTGATACAGTACGGGAAGTTCAAACCACCAAAATTCGACCTTAGCCACGTACCTGAATCATTGCCTCTGTGGATGGCTTACGGGGGAAATGATGCTTTAGCAGATGTAACTGATTTCAAGCACACACTCAAGGATTTGCCATCCTCACCGGAGCTGGTTTATCTGGAAAATTATGGTCATATGGACTTCATTTTAAGTGTGCAAGCAAAGCAAGATCTCTATGACCCTATGATTAGTTTTTTCAAGTCATTGGATGAATTCAGTAGTATGTAA 1200 0.4358 MERLLLAITVSILLGEAVNGFDGGNRPKQKHSLCEELILPAGYPCSEYTTQTKDGFLLGLQRVSSSSSLSLGNDGERGPPVLLLHGLFMAGDAWFLNTPNQSLGFILADHGFDVWVGNVRGTRWSHGHISLLEKNKHFWDWSWQDLALYDLAEMINYINKVTNSKLFVVGHSQGTIISFAAFTQPKIVEKVKAAALLSPISYLDHVSAPLVLRMVKMHIDQMILGMGIHQLNFKSEWGASLLVSMCDTRLSCNDMISSITGKNCCFNESRVDFYLEQEPHPSSSKNLHHLFQMIRKGTFSKYDYGKLKNLIQYGKFKPPKFDLSHVPESLPLWMAYGGNDALADVTDFKHTLKDLPSSPELVYLENYGHMDFILSVQAKQDLYDPMISFFKSLDEFSSM* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2449 399 SUPERFAMILY alpha/beta-Hydrolases 35 391 IPR029058 -
Apr8g2449 399 Pfam alpha/beta hydrolase fold 79 202 IPR000073 -
Apr8g2449 399 Gene3D alpha/beta hydrolase 24 392 IPR029058 -
Apr8g2449 399 PANTHER LYSOSOMAL ACID LIPASE-RELATED 24 393 - -
Apr8g2449 399 PIRSF Steryl_ester_lip 1 395 IPR025483 GO:0016788
Apr8g2449 399 PANTHER TRIACYLGLYCEROL LIPASE 1 24 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2449 Apr-Chr8 34560973 34566046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2449 1 392 Acyl Lipid Metabolism Gene Families AT2G15230 60.500 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2449 K01052 - gmx:100803830 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2449 8 34560973 34566046 Apr8g2449 8 34560973 34566046 ECH