Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2433 ATGGTCGTCGACATCCAAACCTTGGAAGACAGGTATGTTGATTCTTGCAGGAGACATGGTGTTTTGCCTAGTTCTACTATTTTGTCAAGCCTTTTCAAGGCTGAGGTCAAAAAGTCTTGCCAAGAGCTGTGCAACCTGGAGATTTTAATTGATGACCTAAAGGATATTGATATTGCTCCACTTCTTGACATGTGCATGAACCTTGACACTTCTGAAATAGAAGCTGTTGATGTACGTAATGAATCATCATGTGTGTTAAATGGAGAATATGCATTATCATTGATGCGTGCTATTAATCAAAAGCTTCGAGTAGTCGATCTACAGGATCTGTCATTTGGAAAAGACTTCTTACGGGATATCTCACAAAGAGGTTTGGCATGCCAAGTTTTGACATTGAGGTGTTCACGTTTCCGGAAGCTGAACTTGATGGGCAAGTTCATGCATATGCACACCCTTAATCTTGATTTCAGTTCTTCCCTTACTAGTTTCCAGGAGGACTGTTTTAATTGCATGCCCAATCTAATGCGCATCTCAATGTGTGAAACACGGATTACAAATCTTTGGACAACTGTTGCAGCTCTCTCTAAACTTCCTTCTTTGATTGAACTAAGGTTTCAATATTGGCAGTATTGCAATGATGCTGGGCCATCTCTTGTCTCATCCAGTGGGAAGTCAGATGGCACTGCCGAATTTAGCCTACTTGATAGAGTTCCTTTTATTGGTGGATCCTGCATGGACACAACAGAACTGACAGATCCCAACTTTAGTGCTGAAGATCCCCTGAGAAACTTTTATTCCTTTGATGAAGAGGTTATAACTCATGATGTTCAAAGCATGGTTGAGGATTCATCAGATGATAGTGAAGTTGACTTTACTAATCATCATAATAGATATTGGTTGGCAGATGTTTTTCCTGTGTGGAATTCACTAGTGCCTCTTCAGAATGAGTGGTTTACATCACTGAATGAAGATGGAGAAGAGTCATCGCGAGGTGCTTTTACTGGGCATATTGCTGATGTTTCTATGAAGTATATGTCTCGTCATGCATCACCAATATGCTATGAGAAACATTACAGAGAATTCATGATAGCTTCCTTACCAAATCTGAAAATTTTAGATAATTTGCCCATCAGAAAGACGGACAAGGAAAGAGCTACTGGAATATTTTCTCAACATTTTGAATATCTTCCGTACAGATGGAAGCACAAAGAGAGTGTTGTAAGTATTTTACAGAAGAGAGAAATAAAATCAGGCCACATTAAGGGGCAACCTCCTAAGCATAGGTCATCATATCCTTCCGGAAAGTCCCAATATTTTTATTCCAGGTCACTTTCTGCTGCTAAATTGGGGTCTTCAACTTGGCCTTTCTTGCATCCTCTTTCTCTATTAGGATGTGAATTGGATAAGGGATTTCGTCCAAGGCAGTTTGAGTACCATCCATCTGACTCCAGCTTGATGGTCTTTGGAACTTTGGATGGAGAGGTGGTTGTCATAAACCATGAGAATGAGCATATTGTGAGTTATATCCCATCACTTGGAGCAATGAATAGTGTTTTGGGTCTCTGTTGGCTTAAAAAATATCCCTCAAAGCTTATAGCAGGTTCTGACAATGGTTCCTTGAAATTGTATGACATCCACCATATACCAAGAAAAGTTACTGGCATATATGGTAATTCTGGTTGTGTTACCTTCGATGAATTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAACTATTTCTTGCAAGTGGTTACTCAAGAAATGTTGCTTTGTATGATATCAATAATGGGAAGCGCTTACAAGTGTTCACAGATATGCATCGTGGGCATATTAATGTAGTCAAATTTGCTAATCATTCCCCATCAATTTTTGCCACTTCATCATTTGATCAAGATGTCAAGATGTGGGACCTGAGACAAAAACCAATACACCCTTGCTTTACTGCAACCAGCTCTAAAGGAAATGTGATGGTTTGCTTTTCTCCAGACGACCAATATATTCTTGCATCAGCAGTTGATAATGAGGTTAGACAATTTCTCGCTGTTGATGGTAGGCTTCACTTAGTTTTTGATATAGCTCCCACTGAAAGTTCTCAAAATTACACCCGTTCTTATTACATGAACGGGAGGGACTACATCATAAGTGGTAGTTGTGATGAACATGTTGTCCGTATTTGCTGTGCTCAAACAGGGAGGCGCCTGAGAGATATATCCCTGGAGGGAAGAAGCTTAGGAAGTTCCATGTTTGTTCAGTCATTGAGGGGTGATCCTTTCCGAGATTTCAACATGAGCGTGTTAGCAGCTTACATGCGGCCAGGCTCCAAGTCTGAAATTGTTAAGGTCAACTTATTAGCGTCCAGTGGCCATACCAAGGATGACTCTGATGATCTGCGTCCCTGCCCGTCCCACAGTATGGGAGCTTGA 2430 0.4062 MVVDIQTLEDRYVDSCRRHGVLPSSTILSSLFKAEVKKSCQELCNLEILIDDLKDIDIAPLLDMCMNLDTSEIEAVDVRNESSCVLNGEYALSLMRAINQKLRVVDLQDLSFGKDFLRDISQRGLACQVLTLRCSRFRKLNLMGKFMHMHTLNLDFSSSLTSFQEDCFNCMPNLMRISMCETRITNLWTTVAALSKLPSLIELRFQYWQYCNDAGPSLVSSSGKSDGTAEFSLLDRVPFIGGSCMDTTELTDPNFSAEDPLRNFYSFDEEVITHDVQSMVEDSSDDSEVDFTNHHNRYWLADVFPVWNSLVPLQNEWFTSLNEDGEESSRGAFTGHIADVSMKYMSRHASPICYEKHYREFMIASLPNLKILDNLPIRKTDKERATGIFSQHFEYLPYRWKHKESVVSILQKREIKSGHIKGQPPKHRSSYPSGKSQYFYSRSLSAAKLGSSTWPFLHPLSLLGCELDKGFRPRQFEYHPSDSSLMVFGTLDGEVVVINHENEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHHIPRKVTGIYGNSGCVTFDEFDQLTSVHVNSTDELFLASGYSRNVALYDINNGKRLQVFTDMHRGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKPIHPCFTATSSKGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHVVRICCAQTGRRLRDISLEGRSLGSSMFVQSLRGDPFRDFNMSVLAAYMRPGSKSEIVKVNLLASSGHTKDDSDDLRPCPSHSMGA* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2433 809 ProSiteProfiles Trp-Asp (WD) repeats profile. 606 641 IPR001680 GO:0005515
Apr8g2433 809 PANTHER BNAC09G30780D PROTEIN 1 796 IPR046377 GO:0071493|GO:0080008
Apr8g2433 809 Gene3D Ribonuclease Inhibitor 90 226 IPR032675 -
Apr8g2433 809 Gene3D - 470 757 IPR015943 GO:0005515
Apr8g2433 809 SUPERFAMILY RNI-like 91 217 - -
Apr8g2433 809 SMART WD40_4 644 682 IPR001680 GO:0005515
Apr8g2433 809 SMART WD40_4 502 544 IPR001680 GO:0005515
Apr8g2433 809 SMART WD40_4 557 595 IPR001680 GO:0005515
Apr8g2433 809 SMART WD40_4 598 639 IPR001680 GO:0005515
Apr8g2433 809 SMART LRRcap_2 355 373 IPR003603 -
Apr8g2433 809 Gene3D Ribonuclease Inhibitor 335 394 IPR032675 -
Apr8g2433 809 SUPERFAMILY WD40 repeat-like 472 739 IPR036322 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2433 525 688 Miscellaneous Gene Families AT5G08390 25.610 3.65e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2433 - - gmx:100806443 1421.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2433 8 34463312 34474338 Apr8g2433 8 34463312 34474338 ECH