Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2425 ATGGCACCTTTCATGTCCCTCTCTGTGTTATTTCTCTTTCTCCACTACCCCTTTTTATCCCTTTCAACCAACTCTGAAGGGAATGCTTTGCATGCTTTGAGAAGCAGGCTTTCTGACCCCAACAACGTGCTGCAGAGTTGGGACCCAACTCTGGTTAATCCTTGTACTTGGTTCCATGTTACCTGTAACTCCAACAATCATGTGATTCGCTTGGAGCTCTATAAGAATGACTTGAGAGGACAGATTCCTGAGGAACTCAGTAACTTGAAATCGCTTATTAGCATGGATTTCTATGATAACAATTTTGAGGGGAAGATCCCAAAGTCATTTGGCAAGTTGAAGTCACTTAAATTCATGCGGCTAAGCAGCAACAAGTTGACAGGATCAATCCCAAGAGAACTCACTGTTCTCACTAATCTCAAAGTCTTTGATGTTTCTAATAATGACCTATGTGGAACAATACCAGTAGATGGCAATTTTGAATCTTTCCCAGTGGAAAGTTTTGAAAACAACAGGTTTAGTGGTCCCGAGCTAAAAGGACTTGTTCCATATGATTTTGGATGCTGA 567 0.4127 MAPFMSLSVLFLFLHYPFLSLSTNSEGNALHALRSRLSDPNNVLQSWDPTLVNPCTWFHVTCNSNNHVIRLELYKNDLRGQIPEELSNLKSLISMDFYDNNFEGKIPKSFGKLKSLKFMRLSSNKLTGSIPRELTVLTNLKVFDVSNNDLCGTIPVDGNFESFPVESFENNRFSGPELKGLVPYDFGC* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2425 188 Pfam Leucine Rich Repeat 139 170 IPR001611 GO:0005515
Apr8g2425 188 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Apr8g2425 188 SUPERFAMILY L domain-like 23 176 - -
Apr8g2425 188 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 9 73 - -
Apr8g2425 188 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 71 185 - -
Apr8g2425 188 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 9 73 - -
Apr8g2425 188 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 71 185 - -
Apr8g2425 188 Gene3D Ribonuclease Inhibitor 22 183 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2425 Apr-Chr8 34408534 34410861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2425 4 171 Receptor kinase-like Gene Family AT1G71830 51.562 2.28e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2425 - - gmx:100816279 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2425 8 34408534 34410861 Apr8g2425 8 34408534 34410861 ECH