Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2423 ATGACGGTACCCAAGCGAAGCTATACTCGAATTGACACTTTGGGCCTGAAAGCTCGGATTGTTCGGAAGCTTGGTCATCAGAGGGCTGATAAGTACTTTTATCAGCTTGGAAGATTGTTGAGCATAAAGATAAGCAAGTCAGAGTTTGACAAGATTTGCATCAAGACAATTGGGAAGGAAAATGTTCCTCTTCACAATCAACTCATTAGAGCTATTCTCAAGAATGCTTGTCTGTCTAAAGTCCCACCTCTGAGAGGCTCTGCAAGAATAGGGAGTGCCTTAAGTGTAAAAGATTCAAATGGGCAGCGGAGTAGCCCTATGTTTGGGGACACATATCCTCCTTTGATTCCAAGGAGTGGCTCTTTGGCTGCTCGAGACCGAAGGTTCAAGGGCCGCCAAAATGCTTTGGGGCCACTGGGCAAACCCCAAATTGGTCTCGCGTCTGAAGAGTTGATCGATAAGACACTGGAGCAGCAGAGTGCAACAGAACTGAATTCCCTTGGCAGTAGACCTCCTATTTCTGTTGAAGAAGGAGAAGAGGTTGAACAGGTGGCTGGAAGCCCCAGCATTCAGAGTAGGAGCCCAGTTACAGCTCCACTTGGTATATCCATGAACTTTGGTTGCAGTCGTAAACTTCATTCTAATGTATCATTATGTAGCAAATATTATCCAGAGACTTGTCACAGCAACGGAGATCTCCCTGACACAAGATCTTTAAGGAGTCGTTTGGAGCAAAAGTTGGAGAAGGAGGGTTTAACTGTGACAGTGGATTGTGTAAATCTATTGAATAATGCCCTGGATCTGTATCTGAAGAGGTTGATTGAATCATCTATGGGTTTAGCTGGGTCAAGATTTGGAAATGAGCACCAAAGACAATACAGACAGTCAGTAACCGGTTCAAATGTATTGCTACCTGGAAGATATATACAAACACCAACAAGATCTGCTAGTGCATCTGTTTTAGATTTTCGTCTGGCAATGGAATTAAATCCACAAGTTCTTGGCCCAGATTGGCCCATACAACTTGAGAATATTTGCATACGTGCTTCTGAAGAGTGA 1059 0.4391 MTVPKRSYTRIDTLGLKARIVRKLGHQRADKYFYQLGRLLSIKISKSEFDKICIKTIGKENVPLHNQLIRAILKNACLSKVPPLRGSARIGSALSVKDSNGQRSSPMFGDTYPPLIPRSGSLAARDRRFKGRQNALGPLGKPQIGLASEELIDKTLEQQSATELNSLGSRPPISVEEGEEVEQVAGSPSIQSRSPVTAPLGISMNFGCSRKLHSNVSLCSKYYPETCHSNGDLPDTRSLRSRLEQKLEKEGLTVTVDCVNLLNNALDLYLKRLIESSMGLAGSRFGNEHQRQYRQSVTGSNVLLPGRYIQTPTRSASASVLDFRLAMELNPQVLGPDWPIQLENICIRASEE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2423 352 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 5 352 - -
Apr8g2423 352 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 7 280 IPR024738 GO:0070461
Apr8g2423 352 PANTHER TRANSCRIPTIONAL ADAPTER 1 5 352 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2423 Apr-Chr8 34398703 34400765 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2423 - - gmx:100817344 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2423 8 34398703 34400765 Apr8g2423 8 34398703 34400765 ECH