Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2417 ATGAAGTTCATGAAACTTGGTTCCAAGCCAGATACTTTTCAGAGTGATGGGAACAATGTTAGGTATGTGGCAAGTGAGTTGGCATCAGACATCATTGTTAGCATAGGAGATATAAAGTTTTATTTACATAAGTTTCCTCTTCTATCAAAGAGTTCTCACTTACAGAAGTTGATCTCCCTCACCAATGAAGAAAATTTAGATGAAGTTCAGATTTCTGACATTCCTGGTGGTGCAAGTGCCTTTGAGACATGTGCTAAGTTTTGCTATGGCATGATTGTTACCCTTAATCCTTACAATGTAATAGCAACTCGATGTGCAGCAGAGTATCTTGGAATGCATGAGGCTATTGAAAAAGGAAACCTCATTTACAAGATTGATGTTTTCCTCAGCTCTAGCATTTTCCGTAGTTGGAAAGATTCAATCATCCTTCTTCAGACTTCAAAGTCTATGTTAACCTTTGCTGAGGACCTAAAGGTGGTTAATCATTGCATTGAATCTATAGCAAATAAGGCATGTGCTGATGTATCCAAAGTTGACTGGTCCTACACCTATAACCGGAAAAAGCTTCCTGAGGAAAATGGGATTGAGTCAAACCAGAATGGAATCAGAACTCGACTGGTGCCAAAAGACTGGTGGGTTGAAGATTTATGTGAACTTGAAGTTGATTTGTACAAGTCTGTAATTGCAAATATTAAATCCAAGGCACTTCAATCTAACGAAGTAATTGGTGAAGCTTTGAAAGCTTATGTTTACAGAAGATTGCCAAATTTCAGTAAGGGTATGATCCAATGTGGGGATGTGTCAAAGCATCGCATGATAGTTGAAACTATTGTGTGGTTGTTGCCTGCTGAGAAAGGCAGTGTTTCTTGTAGATTCTTACTCAAATTATTGAAAGCTGCCATTTTTGTAGAATCAGGCGATAGGATTAAAGAAGAGCTGGTCAAGAGAATTGGGCAGCAACTGGAGGAAGCTTCTGTAAGTGACATTTTGATTCGCGCACCAGATGGGGATACTACAATCTATGATGTTAGTATAGTACAGAAAATTTTAAGAGAGTTTTTTATGATAGATCACAATGCCGAGATTGAATCAGTTGGGGGTGGTGAACTGGAGGGAATAAGAAAGCCAGGAATATTATCAGATGCATCCAAGCTAATGGTTGCAAAACTCATAGATGGATACCTGGCCGAAATTGCAAAGGATGCCAACTTGCCTTTGTCAGATTTTGTTAATCTTGCTGATTTAATGTCTACAATCTCTCGACCTGCTCATGATAGCCTTTACAGGGCTATTGACACATATCTGAAGGAGCACCCTGGAATCAGTAAGAGTGAAAAGAAGAGGATATGCAAGCTGATGGATTGTAGAAAGCTATCAGTTGATGCATGTTTGCATGCAGTGCAAAATGAGAGGCTACCATTGCGTGTGGTTGTGCAGGTACTATATTTTGAGCAGGTAAGAACTGCTGCATCATCAGGTACAAGCACTCCTGACATACCTAAAGGAATAAAAGATTTGAACAATGAATCCAATGGTAGCTCAAGGTCAGGGACAACTAACCCAGAAGATGACATGGATGGTGTAGCCACAGCTGAGGAGCTGAAGGCATTGAGAAAAGAACTTGCATCATTGAGGCTGAGCAATGGAGTTGGAAACAATGACAAAGATGGAGATACCAAACCCAGCATGGACAAGGCTGTCATTGGCAAGGTGAAAGGGTTGCTGAAGTCTAAGAAATCTTTCATAAAGCTTTGGGCCAGCAAAGGGGGACAAGGGGAAAATAGTGGCTCAGACTCGTCAGAGAGTATTAGTTCTGCTAATCCAGAAGAAGCCAAATCTACTCCTTCCAGAAATAGGAGGCATTCAGTTTCCTGA 1875 0.4048 MKFMKLGSKPDTFQSDGNNVRYVASELASDIIVSIGDIKFYLHKFPLLSKSSHLQKLISLTNEENLDEVQISDIPGGASAFETCAKFCYGMIVTLNPYNVIATRCAAEYLGMHEAIEKGNLIYKIDVFLSSSIFRSWKDSIILLQTSKSMLTFAEDLKVVNHCIESIANKACADVSKVDWSYTYNRKKLPEENGIESNQNGIRTRLVPKDWWVEDLCELEVDLYKSVIANIKSKALQSNEVIGEALKAYVYRRLPNFSKGMIQCGDVSKHRMIVETIVWLLPAEKGSVSCRFLLKLLKAAIFVESGDRIKEELVKRIGQQLEEASVSDILIRAPDGDTTIYDVSIVQKILREFFMIDHNAEIESVGGGELEGIRKPGILSDASKLMVAKLIDGYLAEIAKDANLPLSDFVNLADLMSTISRPAHDSLYRAIDTYLKEHPGISKSEKKRICKLMDCRKLSVDACLHAVQNERLPLRVVVQVLYFEQVRTAASSGTSTPDIPKGIKDLNNESNGSSRSGTTNPEDDMDGVATAEELKALRKELASLRLSNGVGNNDKDGDTKPSMDKAVIGKVKGLLKSKKSFIKLWASKGGQGENSGSDSSESISSANPEEAKSTPSRNRRHSVS* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2417 624 MobiDBLite consensus disorder prediction 506 523 - -
Apr8g2417 624 ProSiteProfiles NPH3 domain profile. 210 487 IPR027356 -
Apr8g2417 624 MobiDBLite consensus disorder prediction 587 624 - -
Apr8g2417 624 MobiDBLite consensus disorder prediction 491 525 - -
Apr8g2417 624 Pfam NPH3 family 210 463 IPR027356 -
Apr8g2417 624 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 1 621 IPR029960 GO:0009958
Apr8g2417 624 SUPERFAMILY POZ domain 21 117 IPR011333 -
Apr8g2417 624 Gene3D Potassium Channel Kv1.1; Chain A 5 121 IPR011333 -
Apr8g2417 624 Pfam BTB/POZ domain 26 118 IPR000210 GO:0005515
Apr8g2417 624 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Apr8g2417 624 MobiDBLite consensus disorder prediction 590 612 - -
Apr8g2417 624 PANTHER OS12G0117600 PROTEIN 1 621 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2417 Apr-Chr8 34368288 34371432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2417 8 493 EF-hand Containing Proteins AT3G44820 35.509 1.06e-99 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2417 - - gmx:100807318 1099.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2417 8 34368288 34371432 Apr8g2417 8 34368288 34371432 ECH