Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2410 ATGAAGCTTCGGAGATCTTCTTTGGGTGTGTTTCTAGGGTTTCTGTTGTTGTCGTTTTCGCCGGCGTCAATGGCGAAATTCGTGGTGGAGAAGAACAGCTTGACGGTGACGTCGCCGGATGACATCAAGGGCACGCACGATAGCGCGATTGGGAACTTTGGGATACCCCAATATGGAGGAAGCATGGCTGGGAACGTGTTGTACCCAAAGGACAACAAAAAGGGATGCAAGGAGTTCGATGAGTATGGGATTTCCTTCAAATCCAAGCCCGGTGCTCTTCCCACTATCGTTTTGCTCGATCGAGGAAATTGCTTCTTTGCTTTGAAGGTCTGGAATGCCCAGAAGGCTGGAGCTTCTGCTGTTCTTGTTGCGGATGATATTGAGGAAAAATTGATAACCATGGACACACCTGAAGAGGATGGGTCATCTGCAAAATATATAGAAAACATAACAATACCATCAGCTCTCATTGAGAAAAGTTTTGGTGAAAAATTAAAGAATGCCATAAATAATGGGGAGATGGTCAACGTCAATCTTGATTGGAGAGAGGCTGTCCCCCACCCAGATGATCGTGTAGAGTATGAATTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTGATGGAATTTGTGAAGGATTTCAAGGGTGCAGCGCAGATATTAGAGAAGGGTGGTTATACTCAATTTACGCCCCATTATATAACTTGGTACTGTCCTCAGGCATTCACATTAAGCAAACAGTGCAAGTCCCAGTGCATAAATCATGGAAGATATTGTGCTCCAGATCCCGAGCAGGATTTCAGCACTGGTTATGACGGGAAAGATGTGGTTGTTGAAAATTTAAGGCAGCTATGTGTTTTCAAGGTGGCAAATGAAACCAAAAAGCCTTGGGTGTGGTGGGATTATGTCACTGATTTTCAAATTAGATGCCCAATGAAGGAGAAAAAATACAACAAGAAATGTGCTGATGCTGTCATTGAATCACTTGGCCTTGATATTAAAAAAATTGAAAAGTGCATGGGAGATCCAGAGGCTGATTCTGAAAATCCTGTTTTGAAAGAAGAGCAAGATGCCCAAGTAGGGAAAGGGTCGCGAGGTGATGTTACCATATTGCCTACTCTTGTTGTCAACAATAGACAGTATCGAGGAAAATTGGAGAAAGGCGCTGTTATGAAAGCTATTTGTGCAGGTTTTGAAGAAACAACTGAACCAGCTGTTTGCTTGAGCAGTGATGTGGAGACAAATGAGTGCTTGGAGAACAATGGTGGTTGTTGGCTGGATAAAACAGCTAACATCACTGCATGCAAGGATACATTCCGTGGGAGAGTATGTGAATGCCCCTTAGTGGATGGTGTGCAGTTCAAAGGAGATGGTTATACAACCTGTGAAGCTAGTGGACCTGGGCGGTGCAAGATAAACAATGGAGGTTGTTGGCATGAAGCTCGGAATGGACATGCATATTCTGCTTGTTCGGATAATGGAGGGGTTAAATGCCAGTGTCCTGCTGGCTTTAGAGGTGATGGTGTCAAAAGTTGTGAAGACATTGATGAATGCAAAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACTTGGGGCAGCTATGACTGCAGTTGCAGTGGGAATCTCCTGTATATCAGAGATCATGATGCCTGCATAAGTGATCAAGAAGGAAAATCTGCTTGGGCTGCTTTTTGGGTCATTCTAGTTGGCTTAGTTGTGGCTGCTGCCGGGGCATACCTTGTGTACAAATATAGAATAAGGTCTTACATGGATTCTGAAATTAGAGCCATCATGGCACAATATATGCCCTTGGACAGCCAAGGAGAAGTTGTAAACCATGTGAACGAAGATAGAGCTTGA 1884 0.4395 MKLRRSSLGVFLGFLLLSFSPASMAKFVVEKNSLTVTSPDDIKGTHDSAIGNFGIPQYGGSMAGNVLYPKDNKKGCKEFDEYGISFKSKPGALPTIVLLDRGNCFFALKVWNAQKAGASAVLVADDIEEKLITMDTPEEDGSSAKYIENITIPSALIEKSFGEKLKNAINNGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVVENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKKCADAVIESLGLDIKKIEKCMGDPEADSENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVMKAICAGFEETTEPAVCLSSDVETNECLENNGGCWLDKTANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEASGPGRCKINNGGCWHEARNGHAYSACSDNGGVKCQCPAGFRGDGVKSCEDIDECKEKKACQCPECSCKNTWGSYDCSCSGNLLYIRDHDACISDQEGKSAWAAFWVILVGLVVAAAGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQGEVVNHVNEDRA* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2410 627 Pfam Complement Clr-like EGF-like 501 521 IPR026823 -
Apr8g2410 627 SMART egfca_6 518 560 IPR001881 GO:0005509
Apr8g2410 627 Gene3D Laminin 411 467 - -
Apr8g2410 627 Gene3D Laminin 472 552 - -
Apr8g2410 627 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
Apr8g2410 627 Gene3D - 24 188 - -
Apr8g2410 627 Pfam PA domain 64 165 IPR003137 -
Apr8g2410 627 SUPERFAMILY PA domain 35 172 IPR046450 -
Apr8g2410 627 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 17 606 - -
Apr8g2410 627 CDD PA_VSR 52 179 - -
Apr8g2410 627 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 17 606 - -
Apr8g2410 627 CDD EGF_CA 518 546 - -
Apr8g2410 627 ProSitePatterns EGF-like domain signature 2. 502 516 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2410 Apr-Chr8 34321746 34327475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2410 25 627 Miscellaneous Gene Families AT2G14740 83.306 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2410 - - gmx:100803958 1234.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2410 8 34321746 34327475 Apr8g2410 8 34321746 34327475 ECH