Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2394 ATGAAGTTGAGACTCAGATCTTTGGAATCCAAAGAAACCCTTAAAATCGAAGTTCCCGATTCATGTTCTTTGCAGGAACTCAAAGACACCATCCCTTGTGCAATCTCTTCTTCTTCATCTCTGCATCTCTCCCTCAACAGGAAGGATGAAATCCACGCTTCCTCGCCGCACGAGTCCCTCCACTCCCTCGGCATAGCCGGCGGCGACCTCATATTCTACTCTCTCAACCCCAACGCCTTCTGCTTCGAAACCCTTCTCCACAAACCCACCCCTCAAGAAGAATCCAATTCTCGCGACATACCCACAATTCAAGACTCGCCGAAGATCGTTTCCGGCGATGCTCCTTCTATTCCCGCCGCCGAAAAGTCTCCGACTCTGGGCGCTGCGGAAGCGGAAACCTCGGATATGATTGATGGGTCTGAATCTGATCACGAGGCGGTGTTGGGGGGGAGCAATTCCGAGCCTTCGTTTGTGAAAAGGGTTCTAAGAGAAGCTCTCGGAAATGAAGTCAGCGATTTCAAGCTGCTAGTCTTCGCTGTTCACGCTGTTATTCTGGAATCTGGGTTTGTTCGTGTGGATCACGTTTCGGGTATGGCGGTTAGTTGCTCTCATCTTCTTGAAGATTGGCCTTCAAACTCGTCTTCAATGTTATCTTTGTGGTATACTCTGCCTGAGATCATGACTAATGGTGCTTCTCATAGCGTGAATTTGAAATTTCAGACATTAGGGCATCTTGTGAATGTTTGTGGTTCACTGTCTGATGATTCCGGTTCGAGGTTGCATATGGTTTTTTTGGATAAATGTAAATTTGCTAGACCTTTAGAGTTGATGCTGGCTAATTCTGAATCTAAGGATAGTTTTGATGACGAGGGAAATGGAGTTTTTGAACTGTGGAAAATGGTGAAGGATAGGCTTGCATTGCCACTGTTAATTGATCTTTGTGAGAAAGCTGGGTTGGATCTTCCACCTTGTTTTATGCGCCTACCCATGGAGCTTAAGCTCGTGATTTTGGAGTGTCTTCCCGGTGTTGATCTGGCTAAAGTAGCTTGCACTTGCTCAGAGTTGCAATATTTGTCCTCCAGCAATGAGTTGTGGAAGAAGAAGTTTGAGGAAGAGTTTGGAATAGGAAGGAATCGAGGAAGGTTTTTTAAGGATTTGTTTGCTATTTATTGGGAAACAAAGAAGAAGTCAGAGAAAGGGCTTCCACTTCGATCTTTTAGGCATGGTAGTACAAGATACACCCCAAGGAGACACCCCAACCCTCTTGGATTCCCTCCAATTTGGGGTGGAGAGTATGATTTGCAGCCTGTTTTTGGTGTAACACCCCTCGGATACCCACCAAGGAGGTCTTTCATTCCCCGGTGTCATCTGAGAGAATTTAATCAGTGA 1389 0.4608 MKLRLRSLESKETLKIEVPDSCSLQELKDTIPCAISSSSSLHLSLNRKDEIHASSPHESLHSLGIAGGDLIFYSLNPNAFCFETLLHKPTPQEESNSRDIPTIQDSPKIVSGDAPSIPAAEKSPTLGAAEAETSDMIDGSESDHEAVLGGSNSEPSFVKRVLREALGNEVSDFKLLVFAVHAVILESGFVRVDHVSGMAVSCSHLLEDWPSNSSSMLSLWYTLPEIMTNGASHSVNLKFQTLGHLVNVCGSLSDDSGSRLHMVFLDKCKFARPLELMLANSESKDSFDDEGNGVFELWKMVKDRLALPLLIDLCEKAGLDLPPCFMRLPMELKLVILECLPGVDLAKVACTCSELQYLSSSNELWKKKFEEEFGIGRNRGRFFKDLFAIYWETKKKSEKGLPLRSFRHGSTRYTPRRHPNPLGFPPIWGGEYDLQPVFGVTPLGYPPRRSFIPRCHLREFNQ* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2394 462 Pfam F-box domain 325 367 IPR001810 GO:0005515
Apr8g2394 462 ProSiteProfiles F-box domain profile. 322 368 IPR001810 GO:0005515
Apr8g2394 462 PANTHER F-BOX PROTEIN SKIP22 1 461 - -
Apr8g2394 462 Gene3D - 325 407 - -
Apr8g2394 462 SUPERFAMILY F-box domain 322 380 IPR036047 GO:0005515
Apr8g2394 462 MobiDBLite consensus disorder prediction 90 104 - -
Apr8g2394 462 Gene3D - 154 324 - -
Apr8g2394 462 MobiDBLite consensus disorder prediction 90 135 - -
Apr8g2394 462 PANTHER F-BOX PROTEIN SKIP22 1 461 - -
Apr8g2394 462 SMART fbox_2 328 368 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2394 K10293 - gmx:100778313 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2394 8 34205428 34207895 Apr8g2394 8 34205428 34207895 ECH