Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2390 ATGGTTTTGAAGTCAATGGTTGCTTCAGCGAGCGATCTAAGTCTTGTGAGGCAATCTAGTGTTGCAGGAAACCCTCCACTTGATTTGAAGAATCGGGTTTTTGGTGGCACAGTCATTAACGTCGGATTTGGTTTCAACAAAGAGAAATGGAAGAGAAATCATGGGGTTAAGGTTTATGCAGCTGTGCAAGTGGGTGTGGAAGAGACAAAGAGTAATGTTTTGGAGGAAACTTTTGGGTTGGATGTGGTTTCAGAGGGAGAGTTGACAGTAAAGGGGTTTGCGGGGATGAGGAAGACCAAGCTTGTGTGCACTGTTGGTCCTGCTTGCAGCTCATTGGAGGATCTTGAAAACTTAGCTTTGGGAGGCATGAATGTCGCCAGGCTCAACATGTGCCATGGCACTATGGAGTGGCACCGTGATGTCATTAGGAAGATCAAGAAGTTGAATGAGGAGAGAGGTTTCTGTGTTTCTCTGATGATTGACACTGAAGGTAGTCAGATTCATGTTGTTGATCATGGAGCTCCTTCTTCGGTTAAAGTGGAGGAAGATTCGGTTTGGCGGTTTACTGCTGAACATTTTGAGGGTTCTCGTCCATTCACCATTCAAGCAAACTATCAAGGTTTTTCTGAAGATATTGAAGTGGGTGACGAACTTGTTATTGACGGTGGAATGGCATGCTTTGAAGTCATTGAAAAGAATGGAAATGACTTGCAGATTAAATGCATAGATGCTGGTCTTTTCCTACCTGGAGCCAAATTTAGCTTCTGGAGAGATGGAAAGCTTGTGAGGAGGAATTACAAGCTCCCCACTCTATCAACAAAGGATTGGGCCAACATTGACTTTGGTATAGCTGAGGGAGTTGATTTTTTTGCCTTATCCTTTGTAAATCATGCTGACTCTGTTAAGGATCTGAAGAACTACCTATCTACCAAGTCAACCAAATCCATAAAAGTTTTGGCAAAGATAGAAAGCTTAGAATCGCTTCATAAACTGGAGGAAATAGTGCAAGCTTCTGATGGCATCATGGTGGCTCGGGGTGACCTGGGAGTCGAAATACCACTTGAACAGATTCCTACAGTCCAAGAGGATATAATTTATGTTTGCAGACAACTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAATCAATGGTTGAGTATCCAACGCCAACACGCGCCGAGGTAGCCGATGTTTCTGAAGCTGTTCGACAGTATGCCGATGCTTTGATGTTGTCTGGTGAATCAGCTATTGGATCGTATGGACGTAAAGCTTTGGCTGTCTTGGACATGACTAGCAGTAGGATGGAATCATGGAGTAGGGAGGAAAACAGAGAGAGTCTTTTAAACCACCATCAACTTGGAGTATCATTGCCAGAATGCATCACTGAGCAAATATGCTATTGTGCTGTTGAAATGGCCAACAACCTTGGTGTGGATGCCATCTTTGTATACACAAAACATGGATACATGGCATCACTCCTATCACGCAACCGCCCAAATCCTCCCATCTTTGCTTTCACCAATGATGACAGTACCCGCATGGCTTTGAATTTGCAATGGGGTGTTGTACCCCTTCTGATTGATTTGTCAGATGATGCTGAATCTAACACCTCAAAGTCTGTCCAACTTATGAAATCTAAAGGATTGATCAGCCAAGGAGATGTTGTTCTTGTGGTCTCAGATGTTGCTCCAACTCGTGCCACTCCTATGGCCTTTCAATCAATTCAGGTGAAGACTATTATCTAA 1749 0.4357 MVLKSMVASASDLSLVRQSSVAGNPPLDLKNRVFGGTVINVGFGFNKEKWKRNHGVKVYAAVQVGVEETKSNVLEETFGLDVVSEGELTVKGFAGMRKTKLVCTVGPACSSLEDLENLALGGMNVARLNMCHGTMEWHRDVIRKIKKLNEERGFCVSLMIDTEGSQIHVVDHGAPSSVKVEEDSVWRFTAEHFEGSRPFTIQANYQGFSEDIEVGDELVIDGGMACFEVIEKNGNDLQIKCIDAGLFLPGAKFSFWRDGKLVRRNYKLPTLSTKDWANIDFGIAEGVDFFALSFVNHADSVKDLKNYLSTKSTKSIKVLAKIESLESLHKLEEIVQASDGIMVARGDLGVEIPLEQIPTVQEDIIYVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGRKALAVLDMTSSRMESWSREENRESLLNHHQLGVSLPECITEQICYCAVEMANNLGVDAIFVYTKHGYMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVVPLLIDLSDDAESNTSKSVQLMKSKGLISQGDVVLVVSDVAPTRATPMAFQSIQVKTII* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2390 582 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Apr8g2390 582 Gene3D - 99 429 IPR040442 -
Apr8g2390 582 TIGRFAM pyruv_kin: pyruvate kinase 97 567 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2390 582 Gene3D - 166 268 IPR015806 GO:0004743|GO:0006096
Apr8g2390 582 PRINTS Pyruvate kinase family signature 154 170 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2390 582 PRINTS Pyruvate kinase family signature 287 301 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2390 582 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2390 582 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2390 582 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2390 582 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2390 582 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2390 582 SUPERFAMILY PK beta-barrel domain-like 167 250 IPR011037 -
Apr8g2390 582 Pfam Pyruvate kinase, alpha/beta domain 464 563 IPR015795 -
Apr8g2390 582 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 91 439 IPR015813 GO:0003824
Apr8g2390 582 SUPERFAMILY PK C-terminal domain-like 458 564 IPR036918 -
Apr8g2390 582 Pfam Pyruvate kinase, barrel domain 96 438 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2390 582 PANTHER PYRUVATE KINASE 45 581 - -
Apr8g2390 582 PANTHER PYRUVATE KINASE 45 581 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2390 582 Gene3D - 431 572 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2390 Apr-Chr8 34185322 34189175 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2390 K00873 - gmx:100780644 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2390 8 34185322 34189175 Apr8g2390 8 34185322 34189175 ECH