Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2225 ATGGGGGCTGGGACTTCCTCAACTTCAGCTAATAAAGGAGAAAAAGATGGAGGATCTAGTTCATCATCATCAAGGCCTAGTCTTGGTGATATCCCAGAGAGTTGCATCTCCTCCTTGTTCATGAATCTTGATCCACCCGATATATGCAAACTAGCCAGAGTGAACAAAGCCTTTCACCGAGCTTCCTCAGCTGACTTTGTATGGGAATCAAAGTTGCCACCAAGTTACAAGTTTCTTGCCAATAAAGTTCTTGGTGAAGAATATCATGCTGCTATGACTAAGAAAGAGATTTATGCAAAACTTTGTCTACCCAATCGCTTTGATGGTGATTCCAAAGAAGTTTGGTTGGACAAGTGCAGTGGACAAGTTTGTTTGTTTATGTCATCCAAGTCCTTGAAGATTACAGGCATAGATGATAGAAGATACTGGAACTATATTCCAACTGAAGAATCCAGGTTCAAGAGCGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTGGTTGGGGAGCTAGAGTTTGAATTCCCTGTGGGGAGTTACAGCTTAATTTTCAGACTCCAATTGGGCAAGGCGTCCAAAAGATTGGGTCGGCGCGTGTGCAACGTCGATCAAGTGCATGGTTGGGACATCAAGCCCGTCCGATTCCAACTCTCAACATCAGACGGCCAGAGTTCACTCTCAGAGTGTTACTTATGTGGGCCTGGTGAGTGGCTCTACTACCATGTTGGAGAGTTCGTGGTCGAAAATCCCAATGAACCCATAAATATCAAGTTTTCTTTGGCCCAAATAGATTGCACTCACACCAAAGGTGGCCTCTCTGTAGATAGTGCCATCATTTGCCCAACGGAGTTTAGAGAAAGGCTTAATCAAATTTAG 876 0.4395 MGAGTSSTSANKGEKDGGSSSSSSRPSLGDIPESCISSLFMNLDPPDICKLARVNKAFHRASSADFVWESKLPPSYKFLANKVLGEEYHAAMTKKEIYAKLCLPNRFDGDSKEVWLDKCSGQVCLFMSSKSLKITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVVGELEFEFPVGSYSLIFRLQLGKASKRLGRRVCNVDQVHGWDIKPVRFQLSTSDGQSSLSECYLCGPGEWLYYHVGEFVVENPNEPINIKFSLAQIDCTHTKGGLSVDSAIICPTEFRERLNQI* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2225 291 Pfam Phloem protein 2 123 281 IPR025886 -
Apr8g2225 291 ProSiteProfiles F-box domain profile. 25 71 IPR001810 GO:0005515
Apr8g2225 291 PANTHER F-BOX PROTEIN 1 290 - -
Apr8g2225 291 PANTHER F-BOX PROTEIN PP2-A15 1 290 - -
Apr8g2225 291 MobiDBLite consensus disorder prediction 1 29 - -
Apr8g2225 291 SUPERFAMILY F-box domain 13 84 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2225 Apr-Chr8 32710366 32714247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2225 - - gmx:100795463 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0750 6 11671536 11674782 Apr8g2225 8 32710366 32714247 PCT